Cajanus cajan (pigeon pea): 109812227
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Entry
109812227 CDS
T04868
Name
(RefSeq) serine/arginine-rich-splicing factor SR34
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109812227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109812227
Spliceosome [BR:
ccaj03041
]
Common components
Common spliceosomal components
SR proteins
109812227
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_YTH1
RRM_7
RRM_3
Motif
Other DBs
NCBI-GeneID:
109812227
NCBI-ProteinID:
XP_020231736
LinkDB
All DBs
Position
Unknown
AA seq
299 aa
AA seq
DB search
MSRRSSRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAED
AIRGRDGYDFDGHRLRVEPAHGGRGHSSSRDRYSSHNNGRAGRGVSRRSEYRVLVTGLPS
SASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKG
YVRVREYDSRRDSSRSPSRGPSHSRGRSYSRSRSRSRSYSRGRSQSKSPKGKSSQRSPAK
SKSPSRSPSRSRSRSKSRSLSGSRSRSRSPLPPRNKSPKKGSASRSPSRSRSRSKSLSR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggcgctcgagcagaactgtctacgtagggaatctccctggtgacatccgtgaa
agagaagttgaagatttgtttctgaagtatggacacattacacacattgacctaaaggtt
cccccaagacccccaggttatgcgtttgtagagtttgaagatgctcaagatgctgaggat
gcaattcgtgggcgtgatggctatgattttgatggtcaccggttacgggtggagcctgcc
catggtggacgtggtcattcatcctcaagagatcgatatagtagtcacaacaatggccgg
gctggacgaggtgtatctaggcgctctgaatatcgtgttctagtcactggattgccctct
tcagcatcctggcaggatcttaaggatcacatgcgtaaggcaggggatgtttgcttttcc
caagtttttcatgatggaagaggtactactggcattgtggattacacaaattatgatgat
atgaaatatgctatcaagaagcttgatgactctgaattccggaatgcattttccaagggt
tatgttcgtgtgagggaatatgattcaaggcgggattcctctagaagtcctagtcgtggc
ccatcccattctagaggaagaagctatagccgcagtcgtagccgtagccgtagttacagt
cggggtcggagccaaagcaaatctccaaagggtaaatcttcacagcgttcacctgctaaa
tctaaatctccatcaagatctccctctcgatctcgctcaagatcaaagtcccgttcatta
tcaggatcacggtccaggtccaggtctccattgcctccgcgtaacaagagccccaaaaag
ggcagtgctagcaggagtcctagtaggagcaggagcaggagcaagagtttgtctcggtga
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integrated database retrieval system
