Cajanus cajan (pigeon pea): 109812355
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Entry
109812355 CDS
T04868
Name
(RefSeq) probable pectate lyase 8 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj00040
Pentose and glucuronate interconversions
ccaj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109812355
Enzymes [BR:
ccaj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109812355
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
109812355
NCBI-ProteinID:
XP_020231892
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MAGSSSAKWVLFLLLALLIREEAMATPQISHLRNVEVEGHGLVSLKNSSMVARAREAEKL
NERAAVANPEEVVSMVEMSIQNSTERRNLGFFSCGTGNPIDDCWRCDPNWQRNRKRLADC
GIGFGRNAIGGRDGKFYVVTDPRDDDPVNPKPGTLRHAVIQDRPLWIVFKRDMVIQLKQE
LIMNSFKTIDGRGVNVHIANGACITIQYVTNVIIHGLHIHDCKPTGNAMVRSSPTHFGWR
TMADGDAISIFGSSHIWVDHNSLSHCADGLVDAVMGSTAITISNNHFTHHNEVILLGHSD
SYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQG
NRYNAPTNPFAKEVTKRVETAATEWKGWNWRSEGDLLLNGAYFTPSGAGASASYARASSL
GAKSSSMVGSMTSNAGALGCRRGRQC
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcgggttcttcttctgcgaaatgggtcctcttcttgcttctcgcgctgctcattcga
gaagaagccatggccacaccacagatctctcacctcaggaatgttgaagttgaaggacat
gggttggtgagcttgaagaactcgtcaatggtggcgagggcacgagaggctgagaagtta
aatgaacgtgctgcagtggcaaacccagaggaggtggtttcaatggttgagatgagcatc
cagaacagcacagagagaaggaatctggggtttttctcttgtggaactggtaaccccatt
gatgattgctggcgttgtgaccccaactggcaacgcaacaggaagcgtcttgcagattgt
ggcattggttttggcagaaatgccattggtggccgtgatgggaagttctatgtggtcaca
gaccccagggatgatgaccctgtcaaccccaaaccaggcactttgcgccatgctgtgatt
caggacaggcctttgtggattgtattcaagagggacatggttattcagttgaagcaagag
ctgatcatgaacagcttcaagaccattgatgggagaggagtgaatgtgcacattgctaat
ggagcatgcatcacaatccagtatgttactaatgtcatcatccatggcctacatattcat
gactgcaaacccactggaaatgccatggtgagaagctcccccacacactttgggtggagg
acaatggctgatggagatgccatctccatatttggctcaagccacatttgggttgatcac
aactcattgtcccactgtgctgatggccttgtggatgctgtcatgggctcaacagccata
acaatttccaacaaccacttcacccaccacaatgaggtgattctgctgggccacagtgac
tcttacacaagagacaagcaaatgcaggtgaccatcgcatacaaccatttcggagaggga
cttatccagagaatgccacggtgtagacatggatatttccacgtggtgaacaatgactac
actcactgggagatgtatgctattggtggaagtgctaaccccaccatcaacagccagggc
aaccgatacaatgctcctactaacccttttgccaaggaggtgactaagagagtggaaaca
gcagcaactgagtggaagggttggaattggaggtcagagggtgatttgttgctgaatggt
gcctatttcaccccttcaggagctggagcctcagccagctatgccagggcctcaagctta
ggagcaaaatcttcttccatggttggttccatgacttccaatgctggtgcactcggttgc
cgcagaggccgtcagtgctag
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