Cajanus cajan (pigeon pea): 109812386
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Entry
109812386 CDS
T04868
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03040
Spliceosome
ccaj04141
Protein processing in endoplasmic reticulum
ccaj04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109812386
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109812386
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109812386
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccaj01009
]
109812386
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109812386
03009 Ribosome biogenesis [BR:
ccaj03009
]
109812386
03110 Chaperones and folding catalysts [BR:
ccaj03110
]
109812386
04131 Membrane trafficking [BR:
ccaj04131
]
109812386
03051 Proteasome [BR:
ccaj03051
]
109812386
03029 Mitochondrial biogenesis [BR:
ccaj03029
]
109812386
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccaj04147
]
109812386
Protein phosphatases and associated proteins [BR:
ccaj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
109812386
Spliceosome [BR:
ccaj03041
]
Complex B
Other components
Prp19 complex
109812386
Complex C
Prp19-CDC5 complex
109812386
Ribosome biogenesis [BR:
ccaj03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
109812386
Chaperones and folding catalysts [BR:
ccaj03110
]
Heat shock proteins
HSP70 / DNAK
109812386
Membrane trafficking [BR:
ccaj04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
109812386
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
109812386
Proteasome [BR:
ccaj03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
109812386
Mitochondrial biogenesis [BR:
ccaj03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
109812386
Exosome [BR:
ccaj04147
]
Exosomal proteins
Proteins found in most exosomes
109812386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DDR
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
109812386
NCBI-ProteinID:
XP_029130038
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MAKGDHGFSIGIDLGTTYSCVAVWLDQQNRVEIIHNDQGNRTTPSFVAFTDDQRLIGDAA
KNQAAANPNNTVFDAKRLIGRKYSDPIIQIDKMMWPFNVVADINDKPMIIIKYKGQEKLL
SAEEISSMILMKMKEIAEAYLEAQVKDVVVTVPAYFNDSQRKATIDAALIAGLNVMRIIN
EPTAAAIAYGIDKRTNCVGERNIFVFDLGGGTFDVSLLTIKDKVFQVKASAGNTHLGGED
FDNRMVNYFVEEIKRKNKVDISGNLRALRRLRTACERAKRTLSFAVSTCVEVDALFQGID
LCSSITRAKFEEINMELFVECMETVDRCLSDAKMEKSSVHDVVLVGGSSRIPKVQQLLQD
YFNGKDLCKSINPDEAVAYGAAVQAALLSEGFKNVPDLVLLDVTPLSLGIAVKGDLMSVV
IPRNTPIPVQKKQIYGTFKDDLTSVQINVYEGERTKASDNNLLGFFSLSGFPPAPKYHPF
DICFDIDVNGILSVSAVETVTCYKNEITIINDQGRLSAEEIKRMIQEAETFQAEDKKFHR
KANAMNALDAYVYKMKSFLKQEDIKLKLLSQEREEISSAITKAMNLLDGKNLHDDGDVFE
DYLKELANLFEPIMGKFG
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggtgaccatggattttccataggaatcgaccttggtacaacctactcctgc
gttgcagtgtggctggaccaacaaaatagagtggaaataatccacaatgaccaaggcaac
agaacaacaccttcttttgttgcttttacagatgatcagaggttgattggtgatgctgct
aagaatcaggctgctgcaaatccaaacaacactgtctttgatgctaagaggttgattggt
aggaaatacagtgatcccattattcagatagacaaaatgatgtggccattcaatgttgtt
gctgatatcaatgacaaacctatgatcatcattaagtacaaagggcaagagaagctcctt
tccgctgaggaaatatcatctatgatcctcatgaaaatgaaggagattgcagaagcatat
ttggaagcacaggtaaaagatgttgttgttactgtgccggcttatttcaatgactctcag
cgaaaagccaccatagacgctgctttaattgctggcctcaatgttatgcggataatcaat
gaacctactgctgcagctattgcatatggcattgacaagagaactaactgtgttggagag
cggaatattttcgtttttgaccttggtggtggtacttttgatgtgtctcttctcacaatt
aaggataaggtcttccaagttaaggcctctgctggaaacactcacctagggggagaggac
tttgacaacagaatggtgaattactttgtagaggagatcaaaaggaagaacaaagtggac
attagtgggaacttaagagcgctaaggaggttgagaactgcatgtgaaagggcaaaacgg
acactctcctttgccgttagtacctgtgttgaggttgatgctttgttccaaggcattgac
ttatgttcttcaatcacacgtgcaaagtttgaagaaattaatatggagctctttgtggag
tgcatggagactgtagataggtgtcttagtgatgctaagatggagaagagcagtgtgcat
gatgttgtccttgttggtgggtcttctaggattcccaaagtgcaacaactcttgcaagac
tacttcaatgggaaggatctttgcaagagtatcaaccctgatgaggctgttgcttatggt
gcagctgtgcaagctgctttgttgagtgaaggatttaagaatgttcctgatttggttctg
ttggatgttacacctctgtcacttggtatagccgtaaaaggagatctcatgagtgttgtg
attcctaggaatactcctattcctgtacagaagaaacaaatatacggaacattcaaagat
gacctaacttctgttcagataaatgtgtatgagggtgagagaacaaaagccagtgataac
aatttgcttggtttttttagtctttccggttttcctcctgctcctaagtatcatcctttt
gatatatgctttgatatagatgtcaatggtattttgtcagtttctgcagtggaaacagtc
acttgctataagaatgagattaccataatcaatgatcaaggaagattgtcagcagaagaa
attaaacgaatgatacaagaagctgagactttccaggctgaagataagaagttccataga
aaagctaatgcaatgaatgctttggatgcttacgtttacaagatgaagagttttttaaaa
caggaagatatcaagttaaaacttttgtcacaggaaagggaggagattagttctgcaatt
acgaaggccatgaatttgcttgatggtaagaatctgcatgatgatggagatgtgtttgaa
gattatctgaaagagcttgctaacctttttgaacccatcatgggcaagtttggttaa
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