Cajanus cajan (pigeon pea): 109812404
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Entry
109812404 CDS
T04868
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c isoform X1
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03040
Spliceosome
ccaj04141
Protein processing in endoplasmic reticulum
ccaj04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109812404
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109812404
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109812404
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccaj01009
]
109812404
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109812404
03009 Ribosome biogenesis [BR:
ccaj03009
]
109812404
03110 Chaperones and folding catalysts [BR:
ccaj03110
]
109812404
04131 Membrane trafficking [BR:
ccaj04131
]
109812404
03051 Proteasome [BR:
ccaj03051
]
109812404
03029 Mitochondrial biogenesis [BR:
ccaj03029
]
109812404
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccaj04147
]
109812404
Protein phosphatases and associated proteins [BR:
ccaj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
109812404
Spliceosome [BR:
ccaj03041
]
Complex B
Other components
Prp19 complex
109812404
Complex C
Prp19-CDC5 complex
109812404
Ribosome biogenesis [BR:
ccaj03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
109812404
Chaperones and folding catalysts [BR:
ccaj03110
]
Heat shock proteins
HSP70 / DNAK
109812404
Membrane trafficking [BR:
ccaj04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
109812404
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
109812404
Proteasome [BR:
ccaj03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
109812404
Mitochondrial biogenesis [BR:
ccaj03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
109812404
Exosome [BR:
ccaj04147
]
Exosomal proteins
Proteins found in most exosomes
109812404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
SUS_EPBD
QSregVF_b
Motif
Other DBs
NCBI-GeneID:
109812404
NCBI-ProteinID:
XP_029130035
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MAKEDQFAVGIDLGTTYSCVAVWQEQHNRVEIIHNDQGNRTTPSCIAFTDKQRLIGDAAK
NQAAANPENTVFDAKRLIGRKYSDPIIQKDKMLWPFKVVAGVNDQPMIIVKYKGQEKRLC
AEEVSAMVLTNMRQIAEAYLESPVKKAVVTVPAYFNDSQRKATIDAAAIAGLTVMRIINE
PTAAAIAYGLDKRTNCVGDRNIFIFDLGGGTFDVSLFTFKDKVIQVKATEGNTHLGGEDF
DNRMVNYFVEEFKRKKKVDISGNPRALRRLRTACERAKRTLSYAVDTTIEVDALFQGIDF
SSLVTRARFEEINMDLFEECMKTVDACLTYANMDKSSVDDVVLVGGSSRIPKVQKLLQEF
FEGKDLCKNINPDEAVAHGAAVQAALLSEDIKNVPDLELLDVTPLSLGTSVKGDIMSVMI
PRNTTIPVKRTQEFCTAEDNQSSVLVDVYEGERSRIDDNNLLGYFYLSGFPQVPLGHPLY
VCFAIDENGILTVSAEEKTTGNRNQVTITNNIERLSPIEIKRIIQEAERYQVEDRKFRRK
ANALNALDDYVYKMEKVLKKDDISSQQRKKISSAVIKATNLLKVNDSEDETEMYEDYLIE
LGSLFDGVIGNFE
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagaagatcaatttgccgtaggaatcgaccttggcacaacgtactcttgtgtt
gcagtgtggcaggagcaacataatagagtagaaataatccataatgaccaaggcaacaga
acaacaccttcttgcatcgctttcacagacaagcagagattgattggtgatgccgctaag
aatcaggctgctgccaacccagaaaacactgtctttgatgctaagaggttaattggtagg
aaatatagtgatcccattattcaaaaagacaaaatgttgtggccattcaaggttgttgct
ggtgttaatgatcaacccatgatcatagttaagtacaagggtcaagagaagcgtctttgc
gctgaggaagtatcagccatggtcctgacaaacatgcggcagattgcagaggcgtatttg
gaatcacctgtaaagaaagctgttgttaccgtgcctgcttatttcaatgactctcagcga
aaagccaccattgatgctgctgcaattgctggcctcactgttatgcgaataatcaatgaa
cctaccgctgcagctattgcatatggccttgacaagagaactaattgtgttggagaccga
aacattttcatctttgacctaggtggtgggacttttgatgtgtctttgttcacatttaag
gacaaagttatccaagttaaggccactgaaggaaatactcaccttggaggagaggacttt
gacaacagaatggtaaactactttgtagaggagttcaagaggaagaagaaagtggacatt
agtgggaacccaagggccttgaggaggttaagaactgcttgtgaaagggcaaaaaggaca
ctttcatacgctgttgataccaccattgaggtagatgctttatttcagggcattgacttc
tcttctctagtcactcgagcaaggtttgaggaaatcaatatggatctctttgaagagtgt
atgaagacagtagatgcgtgtcttacttatgctaatatggataagagcagtgtagatgat
gttgttcttgttggtggctcttctaggattcccaaagtgcagaaactattgcaggaattc
ttcgaggggaaggatctgtgcaagaacattaaccctgacgaagctgttgctcacggtgca
gctgtgcaggctgctttgttgagtgaagacattaaaaatgttccagacttggagctgttg
gatgttacaccactctcacttggtacatcagtcaagggagatatcatgagtgtcatgatt
cctaggaatactactattcctgtaaagaggacacaagaattctgtacagctgaagataac
caatcctctgtcctggttgacgtttatgagggtgagagatcaagaatagatgataacaat
ttgttgggttatttttatctttctggctttcctcaagttcctctgggccatcctctttat
gtgtgttttgccattgatgaaaatggtatcctaactgtttctgccgaggaaaaaaccaca
ggcaataggaaccaagttaccataaccaataacatagaaagactgtcaccaatagaaatt
aaaagaatcattcaagaagctgaaagataccaggttgaagataggaagttccgtaggaag
gccaatgcactgaatgctttggatgattatgtttacaagatggagaaagttttaaagaag
gatgatatcagttcacaacaaaggaagaagatcagttctgcagttattaaggccacaaat
ttgcttaaggttaatgactccgaggatgaaacagagatgtatgaggattatttgatcgaa
cttgggagcctcttcgacggtgtcattggcaactttgaatag
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integrated database retrieval system
