KEGG   Cajanus cajan (pigeon pea): 109812813
Entry
109812813         CDS       T04868                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI1
  KO
K10752  histone-binding protein RBBP4
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03082  ATP-dependent chromatin remodeling
ccaj03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    109812813
   03083 Polycomb repressive complex
    109812813
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccaj03036]
    109812813
Chromosome and associated proteins [BR:ccaj03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     109812813
  Histone modification proteins
   HAT complexes
    HATB complex
     109812813
   HDAC complexes
    Sin3A-HDAC complex
     109812813
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     109812813
    PRC2.2
     109812813
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     109812813
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    109812813
  Chromatin remodeling factors
   NuRD complex
    109812813
   NuRF complex
    109812813
   NuRF complex (fruit fly)
    109812813
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_WDHD1_1st WDR55 EIF3I Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 eIF2A MIOS_WD40 Beta-prop_RIG_1st Beta-prop_HPS5 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 109812813
NCBI-ProteinID: XP_020232460
LinkDB
Position
Unknown
AA seq 423 aa
MGKEEEEMRGEIEERLINEEYKIWKKNSPFLYDLVITHALEWPSLTVEWLPDRHEPPGKD
YSLQKVILGTHTSENEPNYLMLAQVQLPLDDAENDARHYDDDRPDIGGFGCANGKVQIIQ
QINHEGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHNTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINGTPKNKSLDAMQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLLIWDLRTPAASKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKISSPLHIFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQSPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLPEEST
KPS
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggggaaagaggaggaagagatgcggggtgagatagaggaacgactgataaatgaagag
tacaagatatggaagaagaacagtcctttcctgtatgatctggtcattacgcatgccctc
gaatggccttctctcactgtggagtggcttcctgaccgccatgaaccccctggcaaagat
tactctctccagaaggtcatcttgggcacccacacttctgagaatgagcccaattacctc
atgctggcccaggtccaactcccccttgatgatgctgagaacgatgctcgccactatgat
gatgaccgccctgacattggtggctttggctgtgccaatggaaaggttcagatcatccag
cagatcaaccacgagggtgaggttaacagggctcgctatatgccccagaaccccttcatc
attgcgacaaagactgttagtgctgaggtttatgtctttgattatagcaagcatccctct
aagccccctcttgatggggcctgtaaccctgatttgaggcttaggggtcataatactgaa
ggttatggcttgtcctggagtaagttcaagcagggccacttgcttagcggttctgatgat
gctcagatttgcttgtgggacattaatggcactcccaagaataagtccctcgatgcaatg
caaatttttaaggtacacgaaggtgttgtggaagacgtggcttggcatttgaggcacgag
tacttatttggttctgttggtgatgatcaatacttgctgatatgggaccttcgaacgcca
gctgccagcaagcctgtccaatctgttgttgctcatcaaagtgaggttaactgtttggct
ttcaatccctttaacgaatgggttgttgctactggatctacggataaaactgtgaagttg
tttgatctgcggaagatcagtagtccactgcacatctttgattctcacaaggaagaggtt
ttccaggttggctggaatccaaagaatgagactatcttggcttcttgttgtctgggtagg
agactcatggtgtgggatcttagcaggattgatgaagagcagtcaccagaagatgccgaa
gatggtccaccagaattgctgttcattcatggtggtcatacaagcaaaatatctgacttt
tcctggaatccatgtgaagattgggttgttgctagtgtcgctgaagacaacattcttcaa
atatggcagatggcagagaacatataccatgacgaagatgatctgccagaagagtcgacg
aagccatcctaa

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