Cajanus cajan (pigeon pea): 109813189
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Entry
109813189 CDS
T04868
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109813189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaj03021
]
109813189
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109813189
Transcription machinery [BR:
ccaj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109813189
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109813189
PBAF complex
109813189
GBAF(ncBAF) complex
109813189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
C1_2
DUF4428
MG280
Motif
Other DBs
NCBI-GeneID:
109813189
NCBI-ProteinID:
XP_020232915
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MDDSDSELELYTIPSSSRWFAWDEIHETERTAFKEFFDGSSVSRTPKIYKEYRDFIINKY
REEPSRRLTFTEVRKSLVGDVTFLRKAFLFLQNWGLINYGAPSAADAEGDVEDECRVRVE
DGAPTGIRVAATPNSLKPMAGGRGAAKSGGSASGGSLKLPPLASYSDVYGDLIRQKEVKC
GLCGDKCGSGHYRCSQDNFIICTNCFKSGNFGERRSAEDFVLSESSENSGKHDTVWTEGE
TLLLLESVLKHGDDWELVAQSVQTKTKLDCISKLIELPFGELMLGSAHRNVNSNSVNGIM
NNAKQVQSSSADDQETSKTNDQCPELPNENEQNGDAVKESPSKRQRVAALSDSSSSLMNQ
VGLISTVVDPHITAAAADAAVSALCDENLCPREIFDVEEDEGLETERSSLSEMDHSCPKD
GIPLTLRVRAATATALGAAAARAKLLADQEYREIEHLVATIIDAQIEKLLHKVKHFDDLE
LLMEKEHAEMENLKDSILTDRIDVLRRTFRSGITRWKDYSYVKS
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggacgattcagactccgagctcgagctctacaccatcccaagctcttcaagatggttc
gcgtgggacgaaatccacgagacggagcgaacggcgttcaaggaattcttcgacgggagc
tcggtgtcgcgaacccccaagatatacaaagagtaccgcgacttcatcatcaacaagtac
cgcgaggagccctcgcggaggctcacgttcaccgaggtgcgcaagtcgctggtgggtgac
gtcacgttcctgcgcaaggcgttcctctttctccagaattggggtctgatcaactacggc
gcgccttccgctgcggacgcggagggggatgtggaggacgagtgcagggttcgggtcgag
gatggggcgcccaccgggattcgcgtggcggccacgccgaactcgctgaagccgatggcg
ggggggcgcggcgccgccaagagtggggggagtgcgagtgggggttcgctcaagttgccg
ccgctggcttcgtattctgatgtttatggcgatttgattaggcagaaggaggtcaagtgt
gggctttgcggtgataaatgtggttctggacattaccgatgtagccaggataatttcatt
atttgtacaaattgcttcaaaagtgggaatttcggggagagaaggtctgcagaggatttc
gtattaagtgagtcaagtgaaaatagtggcaaacacgacactgtctggactgaaggagaa
actcttctccttttagaatctgtgttgaagcatggggatgattgggaacttgttgctcaa
agtgttcaaaccaagactaaacttgattgtatctcaaaactcattgagcttccctttggg
gagctcatgttgggctctgctcacagaaatgttaacagtaacagtgttaatggcatcatg
aacaatgcaaagcaagttcagtcatcttcagctgacgatcaagaaacttccaagacaaat
gaccaatgtcctgagctaccaaatgaaaatgagcagaatggggatgctgtgaaggaaagt
ccttcaaaaagacagcgtgttgctgccctttcagattccagcagttcattaatgaatcag
gtggggctgatctctactgtggttgatcctcatatcacagctgctgcagctgatgctgct
gtttcagcactttgtgatgaaaatttgtgtccaagggagatatttgatgttgaagaggat
gaaggtttagagaccgagaggtcctctctgtcagaaatggatcacagctgtccaaaggat
ggcatacctttgacactgcgtgttagagctgccactgcaactgctcttggagctgctgct
gctcgagcaaagttgttggccgaccaggaatacagagagatcgaacatttagtggcaact
ataattgacgcacagattgagaaattgctacacaaggttaaacattttgacgatctggag
ctgttgatggagaaggaacacgctgaaatggaaaatctaaaagattctatcttgactgat
cgaattgatgtgttacggagaacatttaggtctggaatcactagatggaaggattattcg
tatgtaaaatcttag
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