Cajanus cajan (pigeon pea): 109813595 Help Entry 109813595         CDS       T04868                                  Name (RefSeq) protein PAT1 homolog isoform X1   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism ccaj  Cajanus cajan (pigeon pea) Pathway ccaj03018   RNA degradation Brite KEGG Orthology (KO) [BR:ccaj00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     109813595  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccaj03019]     109813595 Messenger RNA biogenesis [BR:ccaj03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      109813595   mRNA degradation factors    5'-3' decay     Decapping complex      109813595 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  109813595 NCBI-ProteinID:  XP_020233396 LinkDB All DBs Position Unknown AA seq 829 aa AA seqDB search MVGMDGFGAGGDVGGVPNTQDLRQLGSVPTEGAVFDASQYAFFGQDTVVQEVELGGLEDD DDLPESNEEEFILHREEVEDLRSLSDIDDLSTTFWKLNKVVSEPKSAGFIGEQGSRENSA AEWSQKDDVLNWYEQNAYDNEGSLDGRRMSSQPHSSLSQLHEPKPLYRTSSYPEQQRQQQ HHQLQPSESAPNWFDQHLYGTETTQDGKRWSSQPHSTIAHLQESRPLHRTSLYPDKQQEV PHFPSEPILVPNSSFTSYPPPGGRSQQASPSHNAGHLNIPYHSVGAQMALSPQNRSHFSN SPLQMSGLNHGPPFGGNMRQFPTGSPLNPIIQNQLVNQSGLYPGDHPNISSGIPMINKYD QMLGLMELRDQMPKSAQMGRHNLRFPPQGFDMSGLKSNIGWPRFRSKYMTTEEIENILRM QLAATHSNDPYVDDYYHQGCLAKKSSGAKLRHHFSPAQIRELPLRPSSNSEPHAFLQVDA LGRVPFSSIRRPRPLLEVDPPNSSHGGGPEQSISDKPLEQEPMLAARVTIEDGLYLLLDV DDIDRYLQFNQPQDAGMQLKRKRQGLLEGLATSLHLVDPLGKNGRTTTLVAKDDFVFLRI VSLPKGRKLLARYLQLLFPGELMRIVCMAIFRHLRFLFGGLPSDPAAAETISNLARVVSR CIREMDLGAISACLAAVVCTSEPPPLRPLGSSAGDGASLILVSVLERATELLTDPHAASN YNIANRSLWQATFDEFFGLLTKYCVNKYDSVMQSFLIQGTPNMAGIGSDAARAISKEMPV ELLRASLPHTDDRQKKLLLDFAQRSIPVVGFNSNSGGHDHHVNSESVLS NT seq 2490 nt NT seq  +upstreamnt  +downstreamnt atggtgggtatggatgggtttggagctgggggtgatgttgggggagttcccaacacacag gatcttaggcaactggggagtgttcccacagagggtgcagtttttgatgcatcacaatat gcattttttggtcaagatactgtcgttcaagaagttgagttgggaggtttagaagatgat gatgatttgcctgagtcgaatgaggaggagttcattctccatagagaagaggttgaggat ctaagatcactttccgatattgatgatctcagtactactttttggaagttgaacaaggtt gtaagtgaaccaaaaagtgcaggatttattggtgaacagggatcaagagaaaattctgca gctgagtggtcacaaaaggatgatgttcttaactggtatgaacagaatgcttatgacaat gaaggttctctggatggcagaagaatgtcatcacagcctcattcttctctttctcagtta catgaaccaaagcccttgtacagaacatcctcatatcctgagcagcaaaggcagcagcaa catcaccagctccaacctagtgaatcagctcccaactggtttgatcagcatttatacggt actgaaactactcaggatggtaaacggtggtcatcacaaccacattccaccattgcacac ttacaagagtctaggcccttgcatagaacctctttatatcccgacaagcagcaggaagtt ccacattttcctagtgaaccaattttggtaccaaactcctcatttacttcttatcctcca cctggtggcagatctcaacaggcttctccaagtcataatgcaggtcacttaaacattcct tatcattccgtaggagctcagatggcactatcaccacaaaacagatctcatttctccaat tctccattacagatgagtggactaaaccatgggccaccttttggtggaaacatgcgccaa tttcctactggttcccctcttaatccgataatacagaatcaattggttaaccaatcaggg ttatatcctggagaccatcccaatatttcctcaggtatacccatgattaacaaatatgac cagatgctggggctgatggaactgagggatcaaatgccaaaatcagctcaaatgggtaga cataatctccggtttcccccacagggttttgatatgagtggcctgaaaagcaatattgga tggcctcgattcaggtctaagtacatgactactgaggaaattgagaacattcttagaatg cagcttgcagcaacacacagtaatgatccatatgttgatgattattaccaccaaggctgt cttgcaaaaaagtcttctggtgccaaattgaggcatcacttttctccagcccaaataagg gaacttcctctacgcccctcttctaattctgaaccacatgcttttcttcaggttgatgct ctagggagggttccattctcttcaattcgcaggccccgtcctctactggaagttgatcct cctaattcctctcatggaggtggccctgagcaaagcatttcagataagcctcttgaacag gaaccgatgcttgcagctagggtcacaattgaagatggtctttatcttcttcttgatgta gatgatattgaccgttacctacagtttaatcaacctcaagatgctggtatgcagttaaaa agaaaacgacagggtcttctggaaggacttgctacctcacttcacttagttgatccactt ggaaagaatggacgtacaactacacttgtcgcaaaagacgactttgtttttctcaggata gtttctctacccaagggtcgaaagctacttgctaggtaccttcaactgctttttcctggt gagctaatgcgaatagtctgcatggccatatttcggcatttaaggtttctatttggtggc cttccctctgatccagctgcagcagaaactattagtaaccttgcaagggttgtttcaagg tgcatccgtgaaatggatctcggtgcaataagtgcttgtctagcagctgttgtttgtact tctgagccacctcccttacgaccccttggaagttctgctggagatggggcttccctaatt ctagtatctgtgcttgagagggcaactgaacttctaaccgatcctcatgctgctagcaat tacaatattgcaaatcgttcactttggcaggctacatttgatgaattctttggccttctg accaagtattgtgtgaataaatatgatagtgtcatgcaatcattccttatacaagggact ccaaatatggcaggcattggttcggatgctgcaagagctattagtaaggaaatgccagtt gaactcttacgtgcaagtctacctcacactgatgatcgccagaaaaaactattacttgat tttgctcagcgctctatacctgtagttggatttaatagtaattctgggggtcatgatcac catgtgaattcagagtcagtgctgagttaa

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