Cajanus cajan (pigeon pea): 109813597 Help Entry 109813597         CDS       T04868                                  Name (RefSeq) protein PAT1 homolog   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism ccaj  Cajanus cajan (pigeon pea) Pathway ccaj03018   RNA degradation Brite KEGG Orthology (KO) [BR:ccaj00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     109813597  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccaj03019]     109813597 Messenger RNA biogenesis [BR:ccaj03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      109813597   mRNA degradation factors    5'-3' decay     Decapping complex      109813597 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 DUF8480 Motif Other DBs NCBI-GeneID:  109813597 NCBI-ProteinID:  XP_020233399 LinkDB All DBs Position Unknown AA seq 889 aa AA seqDB search MVDMDGFGAGGGVDGAPNTQNLRELGNAPSGGAVFDASQYAFFGKDVVQEVELGGLEEDD IVPPVESNEEEFFFNREREEAEDVRSLSDIDDLTTTFLKLNKSVSGPRSAGVIGERGSRE NSISEWSHREDSLNWFDQNAYDSEGSMDGKRWSSQPHSSLAHLHDSKPLYRTSSYPEQQR QEQHYHLQHCSSEPVPNWLDQQFYETETAHDQDGKRWSSQPHSSIAHLQESKPLYRTSSY PDKQQELTRFSSEPILVPKSSFTSYPPPGGLSQLGSPSHSTGHLNMPYHTGATQIALSSQ NRSHFSNSALQSSALNLGSHFGGNTRQFPTSSSLNQRLKNQLVNQAGLYPGDHSNLLSNM LQQQLHLHNGSVSPHLMTQLQQQQHRLHHPVQRSAGYLSGFQSHLFNPHLSSGSSVMSKY EHVLGHADGRDHRPKSTHKGKHSLRFSQHGSDASSQKSDSGSFQFRSKYMTSDEIESILR MQLAVTHSNDPYVDDYYHQACLAKKPSAAKLKHPFCPTQIRDLPSRTRSNSEPLAFLQVD ALGRVSFSSIRCPRPLLEVDPPNTSVGSDQKISEKPLEQEPRFAARVTIEDGLCLLLDVE DIDRYLQFNQPQDGGSQLRRRRQVLLEGLATSLQLVDPLGKNGHKVGLAAKDDLVFLRLV SLPKGRKLLAKYLQLLLSGSELMRIVCMTVFRHLRFLFGGLPSDPAASETTNNLAKVVCK CVRGMDLGALSACLAAVVCSAEQPPLRPIGSTSGDGASLILISVLERATELLTDPHASCN YNISNRSFWQASFDEFFGLLTKYCMNKYHSIMQSMLIQSTSNVDDVGPDAAKAISREMPV ELLRASLPHTDDRQRKLLLDFAQRSVPVVGFNSNTGGNGGHVNSETVLS NT seq 2670 nt NT seq  +upstreamnt  +downstreamnt atggtggatatggatgggtttggagctgggggtggcgttgatggagctcccaacacacag aatctcagagaattgggaaatgctccctcagggggtgcagtttttgatgcatcacaatat gcgttcttcggtaaagatgttgtccaggaagttgagttgggagggttagaagaggatgac attgtgcctcctgttgagtctaatgaggaggagttctttttcaatagagaaagagaagag gctgaggatgtaagatctctttctgatattgatgatcttactaccacttttttgaagttg aacaagtctgtgagtggaccaagaagtgcaggtgtgattggtgaacgaggatcaagagaa aattctatttctgaatggtcacacagggaagatagtcttaactggtttgatcagaatgct tatgatagtgaaggttctatggatggcaaaagatggtcatcacagccccattcttcccta gctcatttacatgattcaaagcccttgtacagaacatcctcataccccgagcagcaaagg caggagcaacactaccacctccaacattgctctagtgaaccagttcctaactggcttgat cagcaattttatgaaacagaaactgctcatgatcaagatggcaaacgatggtcatcacag ccacattcctccattgcacatttacaagagtcaaaacccttgtacagaacatcttcatat cctgacaaacaacaggagcttactcgtttttctagtgaaccaattttggtaccaaaatct tcatttacttcttatcctccccctggtggtctatctcagctgggttccccaagtcatagt acagggcacttaaacatgccttatcatactggagcaactcagatagcactatcatctcaa aatcgttctcatttctccaattctgcactacagtcaagtgcattaaaccttgggtcacat tttggtggtaacactcggcaatttcctaccagttcctcacttaatcagcgactaaagaat caattggtgaaccaggcagggttgtatcctggagatcattcaaatctccttagtaatatg ttgcagcaacaattacaccttcataatggatcagtatctcctcatttgatgactcaattg caacaacagcagcatagactgcatcatcctgttcagcgatctgcaggctacttatcaggc ttccagtcccatttatttaatccccacctttcctctggctcatctgtaatgagcaaatat gaacatgtgcttggccatgctgatggtagagatcatagaccaaaatcaactcataaaggt aaacatagtcttcgtttttcccaacatggttctgatgccagtagccagaagagtgacagt ggttcatttcagtttcggtccaagtatatgacaagtgatgaaattgagagcattcttaga atgcaacttgctgtgactcatagtaatgatccttatgtagacgactattaccaccaagct tgcctagcaaaaaaaccttctgcggctaagttaaaacatccattttgcccaacccaaata agggatcttccttcacgaacccgttctaattctgagccacttgcatttcttcaggttgat gctctagggagggtttcattttcgtctattcgttgtcctcgccctcttcttgaggtggat cctccaaacacctctgttggctctgatcaaaagatttcagagaagccccttgaacaggaa cctaggtttgctgccagagtcacaattgaggatggtctttgtcttcttcttgatgttgaa gatattgatcgttacctacagtttaatcagccacaagatgggggatcacaattacgacga agaaggcaggtcctgttggaaggactagcaacttcacttcaacttgttgacccactggga aagaatggacacaaagttgggcttgctgctaaggatgatctggttttcttacgattggta tctcttcccaagggacgtaagctccttgcaaagtatcttcagttgcttctctctggtagc gagcttatgaggatagtctgcatgacagtctttcgccatttaagattcttatttggtggt ctcccctcagatccggcagcttcagagactacaaataaccttgccaaggtggtttgcaaa tgtgtcagaggaatggatctaggtgctctcagtgcttgtcttgcagcagttgtttgttct gcagagcagcctcctctacgacccattggaagcacttctggagatggtgcttcccttatt ttaatatccgttcttgagagggccactgaacttctaactgatccacatgcttcttgcaac tacaacattagtaatcgttcattttggcaggcttcatttgatgaattctttggccttctc accaagtattgcatgaacaaatatcatagtatcatgcaatccatgcttatacaaagtacc tcgaatgtggatgatgtgggaccagatgctgccaaagctatcagtagagaaatgcctgtt gaactcttgcgcgccagcctccctcacactgacgaccgccagaggaagttattactggat ttcgcacagcgctccgtgcctgtggttgggtttaacagcaacacggggggtaatggtggt catgtgaactcagaaacagtgctaagttga

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