Cajanus cajan (pigeon pea): 109813981
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Entry
109813981 CDS
T04868
Name
(RefSeq) probable CCR4-associated factor 1 homolog 9
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109813981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109813981
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109813981
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109813981
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
DEDDh_C
Motif
Other DBs
NCBI-GeneID:
109813981
NCBI-ProteinID:
XP_020233876
LinkDB
All DBs
Position
Unknown
AA seq
274 aa
AA seq
DB search
MPQSNGSILTRSVWSSNLESEFSLIRSVIDSFPLISMDTEFPGVVVRPDAGDPSFRHRHP
AAHYTVLKANVDRLHLIQIGLTLSDHMGNLPTLGSSNAFIWEFNFRDFDVARDAHAHDSV
ELLRRQGIDFEKNREFGIDSVRFAELMMSSGLVCDDAVSWVTFHSAYDFGYLVKLLTQRA
LPEELAEFLRLVKAFFGERVFDVKHLMRFCSNLHGGLDRVCQSLNVERVVGKSHQAGSDS
LLTLHAFQNIRQMYFGKVDRLVQYAGVLYGLEAF
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccccaatctaatggatccatcctcacgcgatcagtgtggtcctccaacctcgaatcg
gagttcagcctaatccgatccgtcatcgactcgttccccctcatctcgatggacactgag
ttccccggcgtcgtggttcgccccgacgccggggatccctcattcaggcaccggcacccc
gccgctcactacaccgtactcaaagccaacgtggaccgcctccacttgatccaaatcggc
ctcactctctccgaccacatgggtaaccttccaaccctaggctcctccaacgccttcatt
tgggaattcaatttcagagatttcgatgtcgcgcgtgacgcccacgcccacgattccgtc
gagttgctgcgtcgccagggcatcgatttcgagaagaatcgcgagttcgggatcgactcg
gtccggttcgcggagctgatgatgtcgtccggtttggtctgcgatgacgccgtgagctgg
gtgacgtttcacagtgcctatgatttcggatacttggtgaaattgttgacacagcgcgcg
ttgccggaggaattagcagagtttctccgacttgtgaaggcgttttttggtgaaagggtt
tttgatgtgaagcacttgatgaggttctgttcgaatttgcatggtgggttggatcgggtg
tgccagtctctgaatgtggaacgagttgtagggaaaagccatcaggccggttcggatagc
ttgcttactctgcacgcttttcagaacattagacaaatgtattttggcaaagttgataga
cttgttcagtatgctggtgttttatatggcttggaagcattttga
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