Cajanus cajan (pigeon pea): 109814105
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Entry
109814105 CDS
T04868
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109814105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109814105
Spliceosome [BR:
ccaj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
109814105
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-UBP
UCH
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
109814105
NCBI-ProteinID:
XP_020234045
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Position
2:19585697..19596997
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AA seq
427 aa
AA seq
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MSSKREREAVDRVEDEGLDNESKRQRLDDDSSPSPPPVSIANPLSGLANNYADIDEEEDY
VRRERGSVNERRNDGSQHNGHRYGEADDSDEEDDSREQFSGRNNRQVEVRKDCPYLDTVN
RQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKV
YCLPDGYEINDPSLDDIRHVLNPRFTAKEVEQLDKNKQWSRALDGSSYLPGMVGLNNIKE
TDFVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLVHRFGELTRKIWHARNFKGQVSPHEF
LQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLKTSKKNTSIIYECFQGELEVVKEIP
NKVIADKKENNEDQNNGKKLSDGVNERYAFVKETSKMPFLMLGLDLPPPPLFKDVLEKNI
IPQVLCH
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaaaaagggaaagggaagctgttgatagagtagaggatgaagggcttgataat
gagtcaaagaggcagaggctggatgacgattcctccccctctccacctcctgtctccatt
gcaaatcctctttctgggttggccaataattatgctgacattgatgaggaggaagattat
gttagaagggaaaggggttctgttaatgagaggaggaatgatggatcccagcataatgga
catagatatggagaggctgatgatagtgatgaagaagatgattcacgtgaacaatttagt
ggaagaaacaatcgccaggttgaggttcggaaggactgtccttatcttgatactgttaat
agacaggttttggattttgactttgagaaattctgttctgtctccctgtccaatttaaat
gtgtatgcatgtttggtttgtgggaagtattaccaagggagagggaagaagtctcatgca
tatacacatagtctggaagcaggacaccatgtttatatcaatctccggactgaaaaagtc
tactgtcttcctgatggttatgaaattaatgacccttctttagatgacattcggcatgtc
ttaaatccaagattcactgcaaaagaagttgaacaacttgacaaaaataagcagtggtct
agggctcttgatggttctagttaccttcctggaatggtgggacttaataatatcaaggag
actgattttgtaaatgtaacaattcaatcattaatgagagttacccccttgaggaatttt
ttccttatccctgaaaattatcaacactgcaaatctccacttgttcatcgatttggtgaa
ctcactaggaagatctggcatgcacggaactttaaaggacaggtcagcccacatgagttt
ctacaagcagtgatgaaggccagtaaaaaaaggtttcggataggtgcacaatctgaccca
gttgagttcatgtcatggcttcttaataccctgcatgcagatcttaagacttcaaagaag
aataccagcatcatctatgagtgttttcagggtgaacttgaggttgtgaaagagattcct
aacaaagtgatagcagataagaaagagaacaatgaagaccaaaacaatggcaagaaactt
tctgatggggtaaatgaacgatatgcatttgtcaaagaaacttcaaaaatgccatttcta
atgttagggttggacttgccaccaccacctcttttcaaggatgtgttggaaaaaaatata
ataccacaggtactgtgccactga
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