Cajanus cajan (pigeon pea): 109814236
Help
Entry
109814236 CDS
T04868
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03030
DNA replication
ccaj03410
Base excision repair
ccaj03420
Nucleotide excision repair
ccaj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109814236
03410 Base excision repair
109814236
03420 Nucleotide excision repair
109814236
03430 Mismatch repair
109814236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccaj03032
]
109814236
03400 DNA repair and recombination proteins [BR:
ccaj03400
]
109814236
DNA replication proteins [BR:
ccaj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109814236
DNA repair and recombination proteins [BR:
ccaj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109814236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_lid_RFC1
RCF1-5-like_lid
PTCB-BRCT
AAA_22
AAA_assoc_2
AAA_19
AAA_30
RuvB_N
nSTAND3
BRCT_2
Sigma54_activ_2
Rad17
Zeta_toxin
AAA_14
AAA_16
Gp44_lid
TsaE
RNA_helicase
RsgA_GTPase
NTPase_1
AAA_17
AAA_33
DNAX_ATPase_lid
AAA_18
AAA_5
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
109814236
NCBI-ProteinID:
XP_020234193
LinkDB
All DBs
Position
Unknown
AA seq
947 aa
AA seq
DB search
MSDIRKWFMKSHDKGNNAAASKSSNQPKPSSDKPQTEKTVPGGQESSGRRVTSKYFNANK
QKVKDEKETQELPAKRKNMKDSEDMPEPKKIHEDDGDDPVLLTKKKKLAAATPTKKLKSG
SGRGIPQKSVDLEESDEDDDKDVVSAAKSGGRGGGGRGAPGRSTGGRGRGGGRGGFMNFG
ERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTN
YLLCDEDIGGRKSEKAKELGTSFLTEDGLFDMIRASKPAKAPPQEDKKPVNKAVAVASQS
KVSPKSQVKAPISSRSPSKQAKPKTATTVHSSLMWTVKHQPKDPKDIIGNQSLVTQLRNW
LKTWNEQFLDTGNKKQGKKQNDSGSKKAVLLSGTPGIGKTTSAKLVCQELGFQAIEVNAS
DSRGKADSKIEKGIGGSNSNSIKDCITNESLGADMYRPKHSKSVLIMDEVDGMSAGDRGG
VADLIDSIKKSKIPIICICNDRYSQKLKSLVNYCLLLSYRKPTKQQMAKKLMDVAKAEGL
QVNEIALEELAERCNGDMRMALNQLQYMSLSMSVINYDDIRQRFLTNAKDEDISPFTAVD
KLFGFNAGKLKMDERINLSMSDPDLVPLLVQENYINYRPSMAGKDDSGIKRMNMIARAAE
SIADADIVNVQIRRYRQWQLSQTSSVASCIIPASLLHGQREILEQGERNFNRFGGWLGKN
STMGKNFRLLDDLHVHILASRGSSSGRDAIRMEYLTLLLQQLTEPLRSLPKAEAVQQVVE
FMDKYSISQEDFDTIVELSKFKGHPNPLDGIQPAVKSALTKAYKEQGKSRVVRVADLISL
PGVKKAPKKRIAAILEPADDAVEKGEGNALDESEEESSDTEELEGTTKAEKLQSELKSLN
SKATQVELELKGTGNSGSKKTSGGRGKGASASGQKVAPAPKTTKRKR
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatataaggaagtggttcatgaaatcgcatgacaaggggaacaatgccgctgcc
tccaagtcttccaatcaacccaagccttcttcggataaaccccagaccgagaaaacggtg
cctggaggtcaggaaagttcagggaggagggtaactagcaaatattttaatgcgaacaag
caaaaggtgaaagatgagaaagaaacgcaggagctccctgctaaaaggaagaatatgaag
gacagtgaggatatgccggagccaaagaaaattcatgaagatgatggagatgaccctgtc
ttgctcactaaaaaaaagaagttagccgctgccactccaacaaaaaaattgaagagtgga
tcaggtagggggattccccagaaatctgtagatttggaagaaagtgatgaagatgatgac
aaagatgtcgtgtctgctgctaaatctggtggaaggggtggtggtggaagaggagcacca
gggcggtcaactggtgggagaggtagagggggtggtaggggtggattcatgaattttgga
gaaagaaaagatcctccacacaaaggagaaaaggaagtccctgaaggtgctccagactgt
ttagctggcttgacttttgtgatcagtggaactctggacagtttggaacgagaagaagca
gaagatttgattaaacgccatggtggccgtgtcactggatcagtcagcaagaaaacgaat
tatttgttatgtgatgaagatattggggggcgaaagtctgaaaaggccaaagagctagga
acttccttcctcacagaggatgggttgtttgatatgattcgtgcatcaaaacctgcaaaa
gctcctccacaagaagacaagaaacctgtgaataaggctgttgcagtagcatcccagtca
aaagtttctccgaaatcacaagttaaggcccctatatcttcacgttcaccctctaagcaa
gccaagccaaagactgccactactgttcattcttctttgatgtggacagtgaaacatcag
cctaaagatccaaaggatatcatagggaatcagtcacttgttacacagcttcgtaattgg
ttgaaaacttggaatgaacaatttttggacactggtaacaaaaaacagggaaaaaagcaa
aatgactctggttccaaaaaagctgtcttgttaagtggaacccccggtataggaaaaaca
acatcagcaaagttggtctgtcaggagcttggtttccaagccatagaggtaaatgctagt
gatagccgtggaaaagctgacagcaaaattgaaaaaggaattggtggaagcaattcaaat
tctatcaaggattgtataaccaatgagtcccttggtgctgatatgtaccggccaaagcat
tctaaatctgtgctcattatggatgaggttgatgggatgtcagctggtgataggggtggt
gttgctgatcttattgacagcatcaagaaatctaaaattcctattatctgcatttgcaat
gaccggtatagccagaaactgaaaagccttgtgaactactgtttgcttctaagttatcgg
aagcctacaaagcaacagatggcaaaaaagttgatggatgttgcgaaggctgaagggctt
caagttaatgagattgcacttgaggaactagcagaaagatgtaatggggatatgcgaatg
gcactaaaccagctacagtatatgagtctctccatgtcagttatcaactatgatgatatt
aggcagcgttttcttaccaatgcgaaggatgaagacatttcaccattcactgctgttgat
aagctttttggttttaatgctgggaagttgaaaatggatgagaggataaatcttagcatg
agtgatcctgatcttgttcctcttcttgttcaggaaaattatattaattacagaccaagc
atggctggtaaggatgacagtggcataaaacgcatgaacatgattgcccgtgcagctgag
tctattgctgatgcagatatagtgaatgtacagattcgcagatatcgacagtggcagctc
tctcaaactagttctgttgcatcatgcataattcctgcttctttgttgcacgggcaaagg
gaaatacttgaacagggagaaagaaactttaaccggtttggggggtggctggggaagaac
tcgacaatgggcaaaaacttcaggcttttggatgatctgcacgttcacattcttgcttct
cgtggatctagttcaggaagggatgccattcgcatggaataccttactcttcttcttcaa
caattgacagaacccctgcgatccctgcctaaggctgaagctgttcagcaagttgtggaa
tttatggataaatactctatcagtcaggaagattttgataccatagtggagttatcaaaa
ttcaagggtcatcctaatccactagatggcatacagcctgctgttaagtcagcattgaca
aaagcatacaaagagcaaggaaaatctcgggtggttcgagttgcagatctaatctctctt
cctggagtaaagaaggcccctaaaaagcggattgctgctattcttgaaccggctgatgat
gcagtggaaaaaggtgaaggtaacgccttagatgaaagtgaagaagagagctctgataca
gaagagttggaaggcaccaccaaggccgagaagctgcaatcagaacttaaaagcttgaat
tcaaaggccacgcaagtagaattggaactaaagggaacgggaaattcaggttccaagaaa
acatccggtggtagaggtaaaggtgcttctgcatctgggcagaaggttgccccagctcct
aagacaacaaaaagaaaaaggtga
DBGET
integrated database retrieval system
