KEGG   Cajanus cajan (pigeon pea): 109814300
Entry
109814300         CDS       T04868                                 
Name
(RefSeq) exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109814300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccaj03019]
    109814300
Messenger RNA biogenesis [BR:ccaj03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     109814300
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 109814300
NCBI-ProteinID: XP_020234276
LinkDB
Position
Unknown
AA seq 301 aa
MGVRNASEDLSSEMEVDAFRRLFPLRFFERHLAESIRPDGRPLGKARETSIFLGAVASAN
GSALVKIGSTTMLTAIKMEVMTPSLESPDEGCLAIDFHMPPICSPIVRPGRPAEASPVVS
KQLSDTILSSRMIDLKELSLVSGKAAWMAYLDVYCLDADGALFDAALLSAVAALSHLQIP
AVAMNDDGKIVLVSDEDGQKRAQEPVNKEKRKLTLKSIPFSLTCILYKNYILADPTAEEE
SIMETHVTIVLDTSGQLISLYKPGGPVLAYTSAIQDCVAITRQRVKELKSFLDNENSAME
V
NT seq 906 nt   +upstreamnt  +downstreamnt
atgggagtacgaaatgcttctgaggacttgtcatcagaaatggaggtagatgcctttaga
cggctctttccacttcgtttttttgagcgtcatcttgctgaatctatacgccctgatggt
agaccacttggaaaagctagagaaacaagcatttttcttggtgctgttgcctctgctaac
gggtcggctcttgtgaagattggatcaactactatgttgactgctattaaaatggaagtt
atgactccctccttggagtcaccagatgagggctgtctagctattgatttccacatgcct
ccaatttgttctccaattgttaggcccggcaggcctgctgaagcatcaccagtggtgtca
aaacagttgtctgacaccattttaagttctagaatgattgatttgaaagaattgtccttg
gtcagtggaaaagcagcttggatggcttacctggatgtctattgtttggatgctgatggt
gctctttttgatgctgctttactttctgcagttgctgccttatctcatctgcaaattcct
gctgttgccatgaatgatgatggcaaaatagtacttgtgtctgatgaggatggacaaaag
cgggcacaggagcccgtcaataaggagaagaggaagcttacattgaaaagcattccattc
tctttaacatgcattctttacaagaattacatcttggcagatcctactgcagaagaagaa
tccatcatggaaacccatgtaacaatagttttggatacatccggtcaactaatatctctg
tacaagcctggtggtccagttcttgcctatacttctgctatccaggattgtgttgcgata
acccgacaaagagtgaaggaactgaagagcttcttggacaatgaaaattctgctatggag
gtttga

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