Cajanus cajan (pigeon pea): 109814307
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Entry
109814307 CDS
T04868
Name
(RefSeq) uncharacterized protein LOC109814307 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109814307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaj03021
]
109814307
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109814307
Transcription machinery [BR:
ccaj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109814307
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109814307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
109814307
NCBI-ProteinID:
XP_020234292
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MSNNTNSKPQPSFLNAPNPNNQLFLQNNGVGMPPQHQGQNLMPPFMRPPMNAAPFMNAAN
HNHFPLQNNQLHMPHMGLPGHQQGQPHVGVLGPQTSACNVNYNNPMFPMQNAAQLNFSQL
QGQILAQNMLNMLQQPNMNMNMSMPNGQFCAPYPMQNMNQQLPMQRPNPSQGVPYGMHHP
GSGPMFGFPNQVPQAVVPQNSMFSANPQLGLVPGNQARPHIDPNEKKLAPSNVNSNAFES
SSTFLPQQLQGNTSGSFNPNMVPTNNSQPHAFMMSYSQENPNSNIKTNVPNSNWKGSPGK
NFRNKPTNRAGSQRGFQKSKFHDVNKGNRRIEFPKQHNGKGPNSWRAGQDGLKSKELKQQ
PERTFYVTYTEQEIQQWREARKKNHPFSNKIQKNSECPKDSKVINREVLQRELKEILAKQ
AELGVEVAEIPSYYLKKSENQGLQREGRNKFNDKRKFQNKSNKKPDRKGQFTKKQKFADK
DSSESPSLKKRKPTLLQKLLSADIKRDKCHLFQVFRFMVVNSFFKHFPDKPLRYPSVLVK
EIGSELDGEEKYLHTRKDVFKQENEETVQKIVNLNDDNGHDSEDEDSDDDENDSIVDSNQ
QKPPSLVKGIEKSDEEEGEIKE
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacaataccaactccaaacctcaaccctctttcttgaatgctcctaatcccaac
aaccaacttttcttgcaaaacaatggtgtgggcatgccaccccagcaccaagggcaaaac
ttgatgcccccttttatgaggccacccatgaatgcagcacctttcatgaatgctgcaaat
cacaaccattttcccttgcaaaacaatcaactgcatatgcctcatatgggtttgcctggt
catcaacagggtcaaccccatgtgggagttttgggtccccaaactagtgcttgcaatgtc
aattacaacaatcctatgtttcctatgcagaatgcagcccagctcaatttttctcaactt
caggggcaaattttagcacaaaatatgctgaatatgcttcagcagcctaatatgaatatg
aatatgagtatgccaaatgggcagttttgtgccccttatcctatgcaaaatatgaatcaa
cagttaccaatgcaaaggccaaacccttctcaaggggttccttatggcatgcatcatcct
ggttctggccccatgtttgggtttccaaaccaagtgcctcaggctgtggtccctcagaat
tcaatgttttctgcaaatccccagttaggtcttgtgcctggaaatcaggcccggccacac
attgacccgaatgagaaaaaactggcgccatcaaatgtgaactcaaatgcttttgaatca
tcatcaacttttttgcctcagcagttacaagggaatacttctggatcatttaatccaaat
atggttcctacaaataactctcaacctcatgcatttatgatgtcatactcacaggaaaat
cctaatagcaacattaaaactaatgttcctaattcaaactggaaaggatcaccaggcaaa
aacttcagaaataaaccaacaaatcgagcgggttctcaaagaggatttcagaagtctaaa
tttcatgatgtcaacaaaggaaacaggagaattgaatttcctaaacaacataatggcaaa
gggcctaacagttggagggcaggacaggatggtttaaaatcaaaggaacttaagcagcaa
ccagaaagaaccttctatgtgacttacactgaacaagaaatccaacagtggcgtgaagcc
cggaaaaagaatcaccctttcagtaacaagattcagaagaacagtgaatgccccaaagac
tccaaggtcattaatagagaggtcttacaaagagagctcaaggaaattttagcaaagcaa
gctgaattgggagttgaagttgctgaaataccatcatactacctgaagaaatctgaaaat
caaggtcttcagagggaagggagaaacaaatttaacgacaaaagaaaatttcaaaacaag
tccaacaagaaaccagaccggaaaggtcagttcaccaagaaacagaagtttgctgacaaa
gattcttcagaaagcccttctttaaagaagagaaaaccaactttattgcagaaactcttg
agtgcagatataaagagggataagtgccacctgtttcaggttttcaggttcatggtagtg
aattctttctttaaacattttcctgataagccactcagatatccatccgtcttggttaaa
gaaattgggtctgaacttgatggtgaagaaaaatacttgcacactagaaaagatgttttt
aaacaagagaatgaggaaacagttcaaaaaattgtaaacctcaatgacgataatggccat
gatagtgaagatgaagacagtgatgatgatgagaatgactctattgttgatagtaatcag
caaaaaccaccttccttggtcaaaggaattgaaaaatctgatgaagaggagggagaaatt
aaagaatga
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