Cajanus cajan (pigeon pea): 109814337
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Entry
109814337 CDS
T04868
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109814337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109814337
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109814337
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109814337
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109814337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
GLOD4_N
Motif
Other DBs
NCBI-GeneID:
109814337
NCBI-ProteinID:
XP_020234336
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MMTVTEASVPILNSPGYYTKPSLKELVARELVEPGYCGRVPDFTVGRFGYGYVRYFTETD
VRGLHIDEVVNFHRHEIVVYSDENDKPAVGQGLNKAAEVVLVLDSEILKSKEGKEGVLVN
KLKQITERQEAQFVSFDLATGEWKFLVKHFSRFGFGDDDEEDIVMDDAEIYDVEKESPSN
ASEVELSHSLPSHLRLDPVKMKEMKLLMFPDEEEVEDLSSKSSSGKQYVRPLQSSAQAIN
HRSTPPVARKTPFPLLEYKHGNFDTKSPGGILMVQQQKGMPPRTIKSQGFKLDLKHETPV
SGNYARNIVDAGLFMGKSFRVGWGPNGILVHSGAPVGSSGNHKMLSSVVNLEKVAFDNLV
RDENKKVSKELIDHALVSPLNFHKGINHVMKEVEFGSCKLTLQKLEANRTTLSEISQQYC
DLIERQLSVPGLSSSSRLGLTHQVMTWEIIRVLFSDREQKAQVESLGADNEEDMMQDMKE
NSLDVDQEALPLMRRAEFSYWLRESVSYHVQNQISSLDDSHHLQHIFVLLTGRQLDEAVQ
LAVAKGDVRLACLLSQAGGSTVNRSDIARQLDIWRNKGLDFSFIEKDRLRLYELLAGNIH
GALHDVKIDWRRFLGLLMWYKLPPNTSLPIAFQTYKHFLDEGTAPYPVPLFIDEGTSDEA
INNTDKHFDISFYLMLLHANEKTEFSFLKAMFSAFASTPDPLDYHMIWHQRAVLEAVGVI
NSNDLHILDMAFVSQLLCLGKCHWAIYVILHLPLREDYPYLHVNLIREILFQYCETWSSD
ESQQQFIEDLGIPTDWMHEALAIYYNYNGNHSKALEQFLQCANWQKAHTIFITSVAHRLF
LKAKHAEIWRIATSMEDHKSEIENWELGAGIYISFYLMRNSLQGDADAMTELDSLQSKNA
ACQGFVSQLNESLAVWGCRLPVDARVVYSKMAGEICDLLLSAIDEGATRDEQLNCFDTAF
GAPIPEDLRSGHLQDAVSLFTSFLTEIAT
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgatgacagtgactgaagcttccgtacctattttgaactcaccgggttattataccaaa
ccttctttgaaggaattagtggcgcgggaacttgttgaaccgggttattgcggtcgtgtg
cctgatttcactgttgggagatttggctatggatatgtcaggtattttactgaaactgat
gttaggggattgcatatagatgaagttgttaattttcataggcatgagatagttgtgtac
agtgatgaaaatgataagcctgcggttggtcagggtcttaacaaggctgctgaagtagtt
ttggtattagatagtgagatattgaagtccaaggaggggaaggaaggggttttagtgaac
aaattaaaacaaattactgagagacaggaagcacaatttgtttcctttgatcttgcgact
ggtgagtggaaattcttagttaaacacttcagcagatttgggtttggtgatgatgatgag
gaagacatcgttatggatgatgctgagatatatgatgttgagaaagaatcaccatcaaat
gccagtgaggttgagctttctcattctcttccttctcatcttaggcttgatcccgttaaa
atgaaagaaatgaaattattgatgtttcctgatgaagaagaggtagaggacttaagtagc
aaatcgtcttctggtaagcagtatgttcggcctttacaaagttctgctcaggcaatcaac
catcgatctaccccaccagttgctcgtaaaactccgtttccattacttgagtataaacat
ggaaattttgatacaaagtctcctggaggcattttgatggttcagcagcaaaagggcatg
cctcctaggactataaaatcgcaaggttttaaactagatcttaaacatgaaactccagta
tctggaaactatgctcgcaatatagttgatgctggtctgtttatgggtaagtctttccga
gttggatggggaccaaatggcattcttgtacactctggtgcacctgtaggaagcagtggt
aatcacaagatgttatcatctgttgtcaatttggagaaagttgcttttgacaatctggtc
agggatgaaaataaaaaagtgagtaaggaacttattgaccatgctctggtatctccttta
aattttcacaaaggaattaaccatgtgatgaaagaagttgaatttggttcctgcaagttg
acacttcaaaagcttgaagctaatcgtacaaccctgtctgagatttctcaacagtactgt
gatcttattgagaggcaattgagtgttcctgggttatcttcctcatctcgtttgggtttg
acccatcaagtaatgacctgggagataattagagttcttttttctgatagagaacaaaaa
gctcaagtagaatctttgggtgctgacaacgaagaagatatgatgcaggatatgaaggaa
aattctctagatgttgaccaagaagcactccctttaatgaggagggcagagtttagttat
tggctgcgggagagtgtttcctatcatgttcaaaatcaaataagctctctagatgattct
catcatctgcaacatatttttgttctcctaactgggcggcaactggatgaagcagtgcag
ctggctgtggccaaaggagatgtgaggttggcttgtttgttaagtcaggctggtggttct
actgtgaatcgctctgatattgcaaggcaacttgatatttggagaaataaagggctggat
tttagtttcattgaaaaggacagattgagactctatgaattgcttgcggggaatattcat
ggcgcattgcatgatgtcaaaattgactggaggagattcttaggtttattaatgtggtac
aaattacctcctaacacttcattacccattgctttccagacttataaacattttcttgat
gagggaacggctccatatccggttcccctttttattgatgaaggaacatcagatgaggct
atcaataacacggataagcactttgacatttcattttatctaatgcttcttcatgctaat
gaaaagacagaattcagctttctgaaggctatgtttagtgcattcgcttctacccctgat
ccgcttgattatcatatgatttggcatcaacgtgcagtcttggaagcagtgggtgttatc
aattctaatgatcttcatattctagacatggcatttgtgtctcagctattgtgcttaggg
aaatgtcattgggccatatatgtgatccttcacctgcctcttcgtgaagattatccatat
cttcatgtaaatctgattcgggaaatactgttccaatactgtgaaacttggagttcagat
gaatctcagcaacagttcattgaggatttaggcatccccacagattggatgcatgaggct
ttggctatttattataattataacgggaatcactcaaaagcccttgagcaatttcttcag
tgtgcaaattggcagaaagctcatactatttttataacttcagttgctcataggttattc
ttgaaagcaaaacatgctgagatatggaggatagcaacttccatggaggaccataaatct
gaaattgaaaattgggaattgggagctggaatttatatttcattttatttgatgagaaac
tcgcttcaaggtgatgctgatgccatgaccgaattggattctcttcaaagtaaaaatgct
gcttgtcagggttttgtcagtcagctaaatgaatccctggctgtttggggttgcagatta
ccagttgatgcaagggtggtgtattcaaaaatggcaggcgagatatgtgatttgctgcta
tcagctatagatgagggtgctacccgtgatgaacagcttaactgttttgatactgcgttc
ggtgctcccattccagaagacctacgctccggtcatcttcaggatgctgtgtctcttttt
accagctttctcacggagattgcaacgtaa
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