Cajanus cajan (pigeon pea): 109814640
Help
Entry
109814640 CDS
T04868
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109814640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109814640
03009 Ribosome biogenesis [BR:
ccaj03009
]
109814640
Enzymes [BR:
ccaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109814640
Spliceosome [BR:
ccaj03041
]
Complex A
U1 snRNP components
U1 related factors
109814640
Complex B
109814640
Ribosome biogenesis [BR:
ccaj03009
]
Eukaryotic type
Pre-60S particles
Helicases
109814640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109814640
NCBI-ProteinID:
XP_020234704
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MAGTATASSMGPRYAPPDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPSSTAAQPKS
SSVPSSSVQVQQSSQGLQRGRSPDFSDRYDRSSGGGLNEAGSRNHQGSKGGGYSSHNVPN
GTNVAGNVNASVKGHVASDAGAGLSPDSYRQRHEITVTGDNVPPPLTSFGSSGLPSEILR
EVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLMPAFVHLKRCGNNSKMGP
TALVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIDRGADIVVATPGRL
NDILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPNRRQTLMFTATWPKEVRK
IAADLLVKPVQVNIGNVDELVANKSITQHVEVLPPMEKQRRLEHILRSQDQGSKIIIFCS
TKKMCDQLARNLTRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDI
RVVVNYDFPTGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKYASDLIKVLEGANQKVPVE
LRDMSSRGGGGMGRSRRWGSSGGRGGRGDSGYGGRSNDSGYGGRNNDSGYGGRSSDAGFG
GRGSDSSYGGRGTAASGRGGGRGFDYEPHRGRSPDKGSSWSDRFKSVSRDRSRSRSPDRA
PVPQHSQSSSFHKAMMEHSGGWDSDINKSFNRDRSRSRSPHRPAPAPAGRERSPVYSFHR
SMMGQRAPEKNCRSNSPPKEWGSGRHFNGEEEEGMIPEEDTIYQSVN
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggctggcacagcaactgcctcttcaatgggtccgcggtatgcaccacccgacccgacg
ctccctaaaccatggcggggtcttgtagatggtaagactgggtatctttacttttggaat
cctgagaccaatgtcacccagtatgagagaccctcgagtacagctgcccagccaaagtct
tcttcagtgcctagctcttctgtccaggttcaacagtcgtcgcaagggttgcagcgtggt
cgcagtcctgatttcagtgataggtacgatagaagtagcggtggtgggttgaatgaagct
ggatcacggaaccatcagggttccaaaggtggaggttatagttctcataatgttccaaat
ggaacaaatgttgccggcaatgttaatgcttctgtcaaaggtcatgtggcttctgatgct
ggagctggactatctcctgattcttatcggcaaagacatgaaataactgtgactggagac
aatgtacctcctccccttacatcatttgggtcttctggtcttccatctgagattctgaga
gaggtacaaaatgctgggttctcagccccaactccaattcaggcacagtcatggcccatt
gctctacaaagtagagatatagttgccattgctaaaacaggctcagggaaaaccttgggg
tatttaatgccagcatttgttcatctgaagcgctgtggtaataactccaaaatgggtcct
actgcattggtactttccccaacgagggagttggcaactcagatccaagatgaagctgtg
aagtttgggaaatcatcaagaatttcttgtgtatgtttgtatggaggagcacctaagggt
cctcaactaagagacattgatcggggagcagatattgtggtagccactcctggtcgcttg
aatgatattcttgagatgagaagaattagtcttcatcaggtctcttacctggtgctagat
gaggcagacaggatgctggatatgggattcgaacctcaaattaggaaaattgtgaatgag
gtgcctaatcgccggcaaactctcatgtttactgcaacatggccaaaggaggttagaaaa
attgcagctgacctgctagtgaagcctgtccaggtgaacatcggcaatgtagatgagctt
gttgctaacaagtccattactcagcatgttgaagtattgccaccaatggagaaacagaga
cggctggagcatatcttgcggtcacaggatcaaggatcaaagataattatattttgctct
acgaagaaaatgtgtgatcaacttgctcgtaacctgacacgacagtttggagctgctgct
attcatggggataaatcccaggcagagagggatcatgtgttgagtcagtttcgaactggg
aggtctcctgtgctagtagccacagatgttgctgcccggggactggatatcaaagacatt
agggtggttgtcaactatgacttccctacaggtgtggaagattatgttcataggattgga
aggactgggagagctggagccactgggctagcttacactttctttggtgaccaggatgct
aaatatgcttcagatctcatcaaagttttggaaggtgcaaaccagaaggtacctgtggaa
cttcgtgatatgtcatctcgaggtggtggggggatgggcagatccagacgatggggttct
tctggtggacgaggtggacgtggtgattctggatatggtggaaggagtaatgactctgga
tatggtggaaggaataatgactctggatatggtggaaggagtagcgatgcaggatttggt
ggaagaggaagcgattcaagttatggcgggagggggactgctgcttctggcagaggtgga
ggccgtgggtttgactatgaaccacacaggggtcggagcccagacaagggatctagttgg
agtgatcgcttcaaaagtgtgagccgtgaccgtagccgcagtcgtagtcctgacagggct
ccagtacctcaacattcccaaagcagcagctttcacaaggcaatgatggaacacagtggt
ggatgggatagtgatatcaataagagctttaatcgggatcgaagccgcagtcgcagccct
cacagaccggcaccagcaccagcaggtcgcgaacgttccccagtttacagttttcatcgt
tcaatgatggggcagcgagcacctgaaaaaaattgtaggtctaatagtcctccgaaagag
tggggcagtggaagacatttcaatggagaagaggaggaagggatgattcccgaagaagat
accatatatcaaagtgttaattag
DBGET
integrated database retrieval system
