Cajanus cajan (pigeon pea): 109815458
Help
Entry
109815458 CDS
T04868
Name
(RefSeq) probable pectate lyase 5 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj00040
Pentose and glucuronate interconversions
ccaj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109815458
Enzymes [BR:
ccaj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109815458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109815458
NCBI-ProteinID:
XP_020235771
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MTSTPLSLLFMLFSLLTPTLISSSHVLNPESVVQEVNRKINGSISRSRRKLGYLSCGSGN
PIDDCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGKIYVVDDDGDDDAVNPKPGTLRHA
VIQDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGSSVHIAGGPCITIQFVTNVIIHGIH
IHDCKQGGNAMVRDSPRHYGWRTVSDGDGVSIFGGSHIWVDHCSLSNCNDGLIDAIHGST
AITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNN
DYTHWEMYAIGGSANPTINCQGNRFVAPDDRFSKEVTKREDAPESEWQGWNWRSEGDLLV
NGAFFTPSGAGASSSYSRASSLSARPSSLVGSITTAAGALTCKKGSPC
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcactccactctctttgcttttcatgctcttctcccttctcactccaaccctc
atttcctcttcacatgttctaaaccctgaatctgtcgtacaagaggtaaacaggaaaata
aatgggtccataagtaggtctaggaggaagttggggtacctatcgtgtgggagtggcaac
cccattgatgattgttggaggtgtgaccctaactgggagaaaaacaggcaaaggctagca
gactgtgcaatcgggttcggcaagaacgccgtgggagggcgcgacgggaagatttacgtg
gtggacgacgacggcgacgacgacgcggtgaaccctaagccggggacactgcggcatgcg
gtgatccaagacgagccactgtggatcatcttcgcgagagacatggtgatcaagctgaag
gaggagctgatcatgaactccttcaagaccatcgatggcagagggtctagcgtccacatt
gcgggtggtccatgcatcaccatacagttcgtgaccaacgtcatcattcatggcattcac
atacacgattgcaagcagggcgggaacgctatggtgcgggactccccacgccactacggc
tggagaaccgtctcggacggtgatggggtgtccatctttggagggagtcacatttgggtc
gaccattgctccttgtccaactgcaacgacggcttgatcgatgccatccatggctccact
gccatcaccatctccaataattatatgacgcatcatgataaggtcatgttgttgggtcac
agtgactcttacacccaagacaagaacatgcaagtcactattgctttcaaccactttggt
gaaggccttgttcaaaggatgccgaggtgtaggcatgggtatttccatgtggtgaacaat
gattatactcactgggaaatgtatgccattgggggaagtgctaatccaaccatcaactgc
caaggcaacagatttgttgcacccgatgacagattcagcaaagaggtgacaaaacgtgag
gatgcaccagagagtgaatggcagggttggaattggaggtcagaaggggatttgttggta
aacggtgcgttttttactccatcgggtgctggagcctcttctagctattcaagggcttct
agcttaagtgcaagaccatcttcacttgttggttctataacaacagctgctggtgcactc
acatgtaagaaaggttctccttgctga
DBGET
integrated database retrieval system
