Cajanus cajan (pigeon pea): 109815601
Help
Entry
109815601 CDS
T04868
Name
(RefSeq) DNA topoisomerase 1 alpha isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccaj03032
]
109815601
Enzymes [BR:
ccaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
109815601
DNA replication proteins [BR:
ccaj03032
]
Eukaryotic type
DNA Topoisomerases
109815601
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Trimer_CC
DUF4407
MscS_porin
Motif
Other DBs
NCBI-GeneID:
109815601
NCBI-ProteinID:
XP_020235943
LinkDB
All DBs
Position
Unknown
AA seq
909 aa
AA seq
DB search
MAVKASGKLNMSYDFDDDEPITFKRSTPKKNLLHSEVRKSNGQSSSLQKGQKSNVPSSKV
SAMKSTVGISQASTSNLKTYHVKSPLANSMSPSLSVKEKPISEQKIPIDGKERKSSMKHL
PKNNCEDSMDEDDNKSLGARLNVNSKNSSKATHVVPKRSFEDSDDDDDDIPLSARLSWNS
NLGTSVSNSDDDDDDIPLSARLSWNSNLGTSVSNYDDSDQKKPISKVQKGPQVGPRVGIE
KERPSTLSVKRPLDKIDSLHSSFKKARLLDSSSSINAKQVSVKPEPKVEHDDDDDDDIPL
SQRIKKSVSSADKSSSLKKFTNVTKVNRATSLSLKKRPKKFKKTGKNSEYSKSTKLLPSS
GDGQKKWTTLVHNGVIFPPPYQAHRVKMLYKGKPVVLTPEQEEVATMFAVMRDTDYMQKD
RFKDNFWNDWRKLLGKNHVIQNLKDCDFSPIYDWYQSEKEKKKQMSSEEKKALKEEKMKQ
EEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIHPHDITINIGKDAPLPE
CPIPGERWKEIRHDKTVTWLAFWNDPINPKLFKYVFLAASSSLKGQSDKEKYEKARMLKG
YVGNIRAAYTQDFTSKDISKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVT
AEAPNKLRFNFLGKDSIKYENTVEVELPVYNAILKFQKNKRPGDDLFDMLDTSKLNAHLK
ELMPGLTAKVFRTFNASITLDNMLNKETKDGDVAEKIVVYQNANKQVAIICNHQRSVSKS
HTAQMSRLNEKIDELQAILKELKTDLDRARKGKPPLKGSDGKIKRNLNPEALEKKIAQTN
AKIEKIQRDMKTKEDLKTVALSTSKVNYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWA
MDVDPDFRF
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggctgttaaggcttctggtaaattaaacatgtcgtatgattttgatgatgatgagcca
ataactttcaaaaggagcacaccaaagaaaaatctattgcattcagaagtcaggaagtca
aatggccaaagttctagtttacagaagggtcagaagtcaaatgtcccatcctctaaagtt
tccgccatgaaatctactgtaggtatctcacaagcatcaacttcaaatctcaagacctat
catgtgaagtcgcctttagcaaattcaatgtcaccatcattgagcgtcaaagaaaagcct
atatcagaacagaaaattcccattgatggtaaggagagaaaaagttctatgaaacatctt
cctaaaaacaattgtgaagactctatggatgaggatgataataaatcattgggtgctagg
ttgaatgtgaactctaaaaattctagcaaagcaacccatgttgttcctaagcgatctttt
gaagactctgatgacgacgacgatgatatccctttgtcagcaaggttatcgtggaattct
aatttgggaacatctgttagtaactctgatgacgacgacgatgatatccctttgtcagca
aggttatcgtggaattctaatttgggaacatctgttagtaactatgatgactctgatcag
aagaaaccaatttcaaaagttcagaaaggaccacaagttggaccgagggttggtattgaa
aaggaaaggccatctacactgtctgttaagcgaccactagataagatcgattccttacac
tcttcatttaagaaggcaagactcttagattcatcttcatcaatcaatgctaaacaagta
tcagtgaaacctgagccaaaggtagagcatgatgatgatgatgatgatgatattcctctc
tcccaaagaataaagaaatcagtgtcatctgcagataaatcgtcttccttgaagaagttt
acaaatgtcactaaagttaatagggctacttccctatctttaaagaaacggcccaagaag
ttcaaaaaaacaggaaaaaattcagaatattccaaatctactaagcttcttcctagctct
ggtgatggacagaaaaaatggactacattggttcacaatggtgttattttcccacctcca
taccaggctcatagggtaaagatgctctataaggggaagccagtggttttgactcctgag
caagaggaggttgccacgatgtttgcagtcatgcgagatacagattacatgcagaaagat
agattcaaggataatttttggaatgactggcgtaagctgctaggaaaaaatcatgtaatt
cagaatttgaaagattgtgacttctccccaatctatgattggtaccaaagtgaaaaggag
aagaagaaacaaatgagttcagaagagaagaaggccttgaaggaggagaaaatgaaacaa
gaggaaaaatacatgtgggctattgttgatggagttaaagagaaggtggggaatttcaga
gttgagccaccaggattgttcagaggccgtggagagcatcccaagatgggcaagttgaaa
agacgcatccatccacatgatatcacaattaatattgggaaggatgcaccacttcctgaa
tgtcctattcctggtgaaagatggaaggagataagacatgacaaaacagttacttggtta
gccttctggaatgatccaatcaatcctaaattattcaaatatgtgtttctggcagctagt
agttccttgaaggggcaaagcgacaaggaaaaatatgagaaagccaggatgttgaagggt
tatgtagggaacattagggctgcatacacacaagattttactagcaaagatatttcaaag
aagcaaatagctgttgctacgtatcttattgacaaattagctttgagggctggcaatgag
aaggacgatgatgaagctgatacagttggttgttgtacattaaaagtggagaatgttact
gcagaagcccctaacaagctgaggtttaacttccttggtaaagactctatcaagtatgaa
aataccgttgaagtagagcttcctgtttataatgcaattttgaagttccaaaagaataaa
cgccctggtgatgatctttttgacatgctggatacaagtaaattaaatgctcatctgaag
gaacttatgcctggcctgacagcaaaagtttttcgaacattcaacgcatctataacttta
gataatatgttgaacaaggaaactaaagatggagatgttgcagaaaagattgttgtttat
cagaatgcaaacaaacaggttgctatcatttgtaatcatcaacgtagtgtttcaaaatct
cacactgcacagatgtcaagattgaatgaaaagattgatgagcttcaggccattttgaag
gagctgaaaacagatttggacagggcaaggaagggaaagccccctctaaagggttcggat
ggaaagataaaaagaaacttaaatcctgaagcactggagaaaaagatagctcaaaccaat
gcaaaaattgagaaaatacaacgtgacatgaagacaaaagaagatcttaaaacggtggca
ttgagcacctccaaggtaaactaccttgaccccaggataacagttgcctggtgcaagcgg
cacgaggttcctattgaaaagattttcaacaaatctctgctggcaaaatttgcttgggca
atggatgtggatcctgacttcagattctga
DBGET
integrated database retrieval system
