Cajanus cajan (pigeon pea): 109815816
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Entry
109815816 CDS
T04868
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 34
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccaj03400
]
109815816
Enzymes [BR:
ccaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
109815816
DNA repair and recombination proteins [BR:
ccaj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
109815816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RQC
HRDC
ResIII
DUF4349
Motif
Other DBs
NCBI-GeneID:
109815816
NCBI-ProteinID:
XP_020236207
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MEDNEILEELLNIEVEIQDVQEQIRALIERQENLYERKSELSAILEACKESGNEANNVAS
STAENWSGTFEWDSEADDVRLNVFGISSYRANQKEIINAIMSGRDVLVIMAAGGGKSLCY
QLPAVMRDGIALVVSPLLSLIQDQVMGLTALGIPAHMLTSTNKGDEKFIYKALEKGEGEL
KVLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKSLGILKTQ
FPNVPMVALTATATQRVQNDLIEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVIDEI
AEFIQESYPNNESGIVYCFSRKECEQVAKELRERGVSADYYHADMDVNFREKVHMRWSNN
KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRPGDV
PRQSSMVFYENTGLQNLYDIVRYCQSKRQCRRSAFFRHFAEPLQECNGMCDICAFASEVK
EVDVSGHAKLMVSLLQDMQANDQRSTMLQLVDKMKIKQKELGSELKREEIEQLILHLLLE
RSLKEEFQHTAYATNAYVTVGPLARQILQGKKSVKLEIYTEQRTKAGVRSVKRSLGSSGL
ELKLDELRKELSSAHGGILPHSVLSTEQINLLSSQKPNSLEQLEKVIGKLKTEKYGHRII
EQIEKYSNFKPADKQVTDGRAAKRSKTKKNLVLIESSEDEEC
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaacgagattctagaggagcttctcaacatcgaggttgagattcaagatgtc
caagaacaaataagggccttgatcgagaggcaagagaatttgtacgagagaaaatcggag
ctgagtgctattctggaagcgtgtaaagaatctggaaacgaggctaataatgtggcatca
agcactgcggaaaattggagtgggacgtttgaatgggattctgaagcagatgatgttagg
ttgaatgtttttggcatttcgtcctaccgtgcaaatcaaaaagagataattaatgccatt
atgagtggaagagatgttctggtgattatggctgcaggtggtgggaagagcctctgctac
cagcttcctgctgttatgcgtgatggaattgctctagtcgtcagtcctttgctttcatta
atacaagatcaggtaatgggtttgactgctctgggcattccagcacatatgttgacttca
acaaataaaggggatgagaagttcatatacaaggctttggagaagggagagggggaactc
aaagtattgtatgtcactccagaaaagatatcaaaaagcaagaggtttatgtcaaaactt
gaaaaatgccatcatgctggtcgactctctctaatttcaattgatgaggcacattgctgt
agtcagtggggtcatgactttcgacctgactacaagagcctcggtattctcaagacacag
ttccctaatgttcctatggttgctttgactgccactgctactcagagggtccaaaatgat
ctgatagagatgttgcatattcctagatgtgtcaaatttgtcagcacagtaaataggcca
aacttgttttatatggtaaaggagaagtcatccgttgggaaggtagtaattgatgaaatt
gcagaattcattcaagaatcttatccaaataatgaatcagggattgtttattgcttctct
aggaaggaatgtgaacaggttgcaaaggagttgagggagagaggagtttcagctgattat
tatcatgcagacatggatgtaaattttcgtgaaaaagttcacatgaggtggagcaataac
aagctgcaggtcatagtcggtacagtagcttttggtatgggaatcaacaaaccagatgtc
aggtttgtcatccatcacagcttgagtaaatcaatggaaacatactaccaggaaagtggt
cgagctggccgagatggacttccttctgaatgcttgctgtattttagacctggtgatgtt
cctcgtcagagctcaatggtcttctacgaaaacaccggactgcagaatctctatgacata
gtacgatattgtcagtccaaaagacaatgccgacgaagtgcctttttccggcattttgct
gagccacttcaagagtgcaatgggatgtgcgacatctgtgcattcgcaagtgaggtgaag
gaagtggatgtttctggtcatgcaaaactgatggtttcattgttgcaagacatgcaagca
aatgatcagaggtcaacaatgttgcaattagttgataaaatgaaaataaaacagaaggaa
ctaggttctgaattgaaacgagaggaaattgagcagctcatattacaccttttacttgag
cggtctttgaaagaagaatttcagcatacagcttacgccacaaatgcttacgttaccgtg
gggccgttggcaaggcaaatattacaagggaagaaatctgtgaaacttgagatttatact
gaacagagaactaaagctggtgtaagatcagtgaaacgcagccttgggtcctccggtttg
gagctaaagcttgatgagctgagaaaagaactgtcctctgcccatggaggaatacttcca
cactctgtcttatccactgaacaaatcaacttgttaagttctcaaaaacctaactcactg
gagcagttggagaaggtaattggaaaactgaagacagaaaagtatggacatagaataatt
gagcaaattgaaaaatattcaaatttcaagcctgctgataaacaagtaactgatggtagg
gctgcgaagaggtcgaagaccaagaaaaatcttgttcttattgaaagtagtgaagatgaa
gaatgctaa
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