Cajanus cajan (pigeon pea): 109816020
Help
Entry
109816020 CDS
T04868
Name
(RefSeq) clathrin heavy chain 1 isoform X2
KO
K04646
clathrin heavy chain
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04142
Lysosome
ccaj04144
Endocytosis
ccaj05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109816020
04142 Lysosome
109816020
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
109816020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccaj04131
]
109816020
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccaj04147
]
109816020
Membrane trafficking [BR:
ccaj04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
109816020
Exosome [BR:
ccaj04147
]
Exosomal proteins
Proteins found in most exosomes
109816020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
109816020
NCBI-ProteinID:
XP_020236459
LinkDB
All DBs
Position
Unknown
AA seq
1705 aa
AA seq
DB search
MAANAPISMKETITLGSVGINPQFITFTHVTMESDKYICVRETSPQNSVVIIDMSMPMQP
LRRPITADSALMNPNSRILALKAQVPGTTQDHLQVFNIEMKAKMKSYQMKEQVVFWKWIT
PNTLGIVTQTSVYHWSVEGDSEPTKMFDRTANLSNNQIINYRCDPNEKWLVLIGIAPGSP
ERPQLVKGNMQLFSMDQQRSQALEAHAACFATFRVAGNDKDSTLICFASKSMNAGQVTSK
MHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVSMQISNKYGFIYVITKLGLLFVYDLE
TATAVYRNRISPDPIFLTTEAPSVGGFYAINRRGQVLLATINEASIVPFVSGQLNNLELA
VNLAKRGNLPGAEELVVKRFQELFAQTKYKEAAELAAESPQGILRTPETVAKFQTVPVQA
GQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLVK
TVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRADAQG
AVNFALMMSQMEGGCPLDYNTITDLFLQRNLIREATAFLLDVLKPNLLEHGYLQTKVLEI
NLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLFIRALQHYTELPDIKRVIVNTHAIE
PQALVEFFGTLSKEWALECMKDLLLVNLRGNLQIIVQTAKEYCEQLGVDACIKLFEQFKS
YEGLYFFLGAYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEAK
LPDARPLINVCDRFGFVPDLTHYLYTSNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPED
FIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDSN
NNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELVNVTNKNSLFKLQARYV
VERMDSDLWEKVLNPENEFRRQLIDQVVSTALPESQSPEQVSAAVKAFMTADLPHELIEL
LEKIVLQNSAFSGNFNLQNLLVLTAIKADPTRVMDYINRLDNFDGPAVGEVAVEAQLYEE
AFAIFKKFNLNVQAVNVLLDNLRTIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIES
FIRAEDSTQFLEVIKAAEDAEVYHDLVRYLLMVRQNNKEPKVDSELIYAYAKIDRLGEIE
EFILMPNVANLPNVGDRLYDDALYEAAKIIFAFISNWAKLAVTLVKLKQFQGAVDAARKA
NSSKTWKEVCFACVEAEEFRLAQICGLNVIIQVDDLEEVSEFYQNRGCFNELISLMESGL
GLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYIQ
YDEFDNAATTIMNHSPEAWDHMQFKDVIVKVASVELYYKAVHFYLQEHPDMINDVLNVLA
LRVDHTRVVDIMRKAGHIRLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLHESIDLH
DNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDCMETCSQSGDR
ELSEDLLVFFIEQGKKECFASCLFVCYDIIRPDVALELAWMNNMIDFAFPYLLQFIREYT
GKVDELIKHKIETQNEEKAKEKEEKEVIAQQNMYAQLLPLALPAPPMPGMGGGGYAPPTT
PPMGGMGMPPMPPFGMPPMGGSGSY
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaacgcccctatatccatgaaagagaccataacgctgggaagcgttggaatc
aacccgcaattcattacatttactcatgtgacaatggaatcagataagtacatatgtgtc
agggaaacttcacctcagaacagtgttgttatcattgacatgagcatgccaatgcagcct
ttgagacggcccataaccgctgattctgctttgatgaaccccaattctagaattcttgct
cttaaagcccaagttccggggaccactcaggaccatttgcaagtttttaacattgaaatg
aaagcaaagatgaaatcgtatcagatgaaagaacaggttgtcttttggaagtggataact
ccaaatacactgggaattgtcactcagacgtctgtatatcattggtcagttgaaggtgat
agtgagccaacaaagatgtttgaccgaacagctaatctgtcaaataaccaaattatcaat
tatcgttgtgatcctaatgaaaaatggttggttttgattggaattgctcctggttcacca
gagagaccacaactagtaaaaggaaacatgcaactcttctctatggatcagcaacgtagt
caggctcttgaagcacatgctgcctgttttgctacgtttagagtggctgggaatgataag
gattctactcttatttgttttgcatcaaagagtatgaatgctggacaagttacatcaaag
atgcatgtcattgaacttggtgcccagccaggcaaaccatcatttactaaaaaacaagca
gatctgttcttccctccggactttgctgacgactttcctgtgtcaatgcagatttcaaat
aaatatggatttatttatgttatcacaaagcttggacttttgtttgtctatgacctggaa
actgcaactgcagtttatagaaaccgaatcagtcccgatcctatatttttgaccacagaa
gcaccatcagtagggggtttttatgccatcaatagacgtggtcaagtgttgcttgctaca
ataaatgaagcatccattgtaccttttgttagtggccagctaaacaatttggaacttgct
gttaatctggctaaaagaggaaacctccctggtgcagaagaattggttgtcaagcggttt
caagaattatttgctcagaccaagtataaggaagctgcagagcttgctgcagaatctcca
caaggaattcttcgaactcctgagactgttgctaaatttcagactgtacctgtgcaagct
gggcaaacaccaccactgttacagtactttggtactctgttaaccaggggaaaactcaat
gcttttgagtcattggaactatcacggcttgtggtaaatcaaaacaaaaagaaccttttg
gaaaattggctagcagaggacaaacttgaatgcagcgaggagcttggtgatcttgtgaag
acagtggataatgaccttgcattgaaaatatatattaaagccagagccacaccgaaagtt
gttgcagcatttgctgagaggagggagtttgacaagattctgatatactcaaagcaggtc
ggatacacgcctgattatttgttccttctgcaaacaatattgcgggcagatgctcagggt
gctgtaaattttgctctgatgatgtcccaaatggaggggggttgccctcttgactacaac
acaataactgatctctttcttcagaggaatttaatccgcgaggcaactgcctttttattg
gatgtgctgaaaccaaaccttctggaacatggatatcttcaaacgaaggtgctggaaatt
aatcttgtgacctttccaaatgttgctgatgctatattggccaatggcatgtttagtcat
tatgatcgtccacggattgctcagctttgtgaaaaggctggccttttcatacgggctctt
cagcattatactgagttgcctgacatcaaacgagtcattgtgaacacacatgctattgaa
ccacaggctctagttgagttctttggaactctttcgaaagaatgggcgctagagtgcatg
aaagatcttttactggttaaccttaggggaaatcttcaaataattgtgcagactgctaag
gaatattgtgaacagctcggtgttgatgcatgcattaaactctttgagcaattcaagtcc
tatgaaggactatactttttcttgggtgcatatttgagctctagtgaggatcctgatatt
cacttcaagtatattgaagcagctgctaaaactggacaaattaaggaggtagagcgtgtt
actcgggaatcaaacttttatgatgctgagaagaccaagaactttctaatggaagccaag
cttccagatgcacgacctttgattaatgtgtgtgatcgttttggttttgttccggatctc
acccattatctctacaccagcaacatgcttcgttatatcgagggatatgttcaaaaggta
aatccaggaaatgctcctctagttgtaggacagttgttggatgatgaatgccctgaagat
ttcattaaaggtcttatactttcagttaggtctcttcttccggttgagcctttagtcgaa
gaatgtgagaagaggaatcgtctccgcttgcttactcagttcttggagcatcttgtaagt
gagggaagccaggatgtgcatgtgcataatgctctgggtaaaattatcattgacagcaat
aacaatcctgagcattttcttacaaccaacccatattatgattcccgtgttgttggtaaa
tattgtgagaaacgggatcctacacttgctgttgttgcttaccgaagggggcaatgtgat
gatgagcttgttaatgttaccaataaaaattccttgttcaaactccaagccagatatgtt
gtggaacgtatggattctgacctttgggagaaagttcttaatcctgagaatgagtttaga
aggcagttgattgatcaagtggtgtccactgctttgcctgaaagccagagtcctgagcaa
gtttcagctgcagtgaaagcttttatgaccgctgatcttccccatgagttgattgagctt
ctcgaaaagattgtcttacaaaattctgctttcagtggaaactttaatctgcaaaatttg
ctggtccttactgcaatcaaggcagatcctacaagagtcatggattacattaataggttg
gacaacttcgatggccctgctgttggggaggtggcagtagaggcacaattatatgaagaa
gcttttgccattttcaaaaaatttaatttgaatgttcaggctgtaaatgtcctactagat
aatcttcggaccattgatcgagctgtggagtttgcattccgggttgaagaagatgctgta
tggagccaagtagctaaggcacagctaagagaaggcttagtaagtgacgcaattgaatca
ttcatccgtgcagaagattccactcaattcttagaggttataaaagctgctgaagatgca
gaagtataccatgatctagtaaggtaccttctcatggttaggcagaacaacaaagagccc
aaggtggacagtgagcttatttatgcatatgcaaagattgatcggcttggagaaattgaa
gagtttatattaatgccaaatgttgctaatttgccaaatgttggagaccgtttgtatgat
gatgctctctatgaggctgcaaaaattatatttgcttttatttctaactgggctaagtta
gcagtgacattggtgaagcttaaacaattccaaggtgctgttgatgctgctaggaaagca
aacagttcaaaaacatggaaggaagtttgttttgcatgtgttgaggctgaggaattccgc
ttggctcagatttgtggtctcaatgtcattattcaggtggatgatttggaagaggttagt
gagttttatcagaacagaggatgctttaatgaactcatatctctaatggagagtggacta
ggactggagcgcgcccatatgggtatctttactgagttgggagttctttatgcaagatat
cgttatgagaagttaatggagcacattaagttgttctcaactcggcttaacattcccaag
cttattcgtgcctgtgatgagcagcagcactggaaggaacttacatacctatatatccaa
tatgatgagtttgataatgctgcaaccactataatgaatcactctccagaagcatgggac
cacatgcaattcaaagatgttatagttaaggttgcaagtgtggagctctactataaggct
gttcacttttacttgcaagaacaccctgatatgataaatgatgttcttaatgtgcttgcc
cttcgtgtggaccatacccgtgttgtggatataatgcggaaggcaggccacatccgactg
gttaagccatacatggttgcagttcaaagcaataatgtgtctgctgttaatgaagctttg
aatgaaatttatgttgaggaggaggactatgatagacttcatgaatcaatagatctgcat
gacaacttcgatcagataggtcttgcacagaagattgagaagcatgagcttctcgagatg
aggcgtgttgctgcttatatttataagaaagctggaagatggaagcagtccattgctttg
tcgaaaaaagacaatctttataaggactgtatggaaacgtgctctcaatctggtgaccgt
gagctctccgaggatttgcttgttttctttattgagcagggaaagaaagagtgctttgcg
tcatgcctctttgtgtgttatgatattatacggccagatgtggctcttgagctagcttgg
atgaacaatatgattgattttgctttcccatacctcctacagtttattcgagagtatact
ggtaaagttgatgagcttataaagcacaagattgaaacacaaaatgaggagaaagctaaa
gagaaggaagagaaggaagttattgctcagcagaatatgtatgcccagttactaccactt
gctttgcctgcaccaccaatgccaggtatgggtggaggagggtatgctcccccaacaaca
cctcctatgggtggtatggggatgccaccaatgccccctttcggcatgcctccaatgggc
ggcagcggctcctactga
DBGET
integrated database retrieval system
