Cajanus cajan (pigeon pea): 109816228 Help Entry 109816228         CDS       T04868                                  Name (RefSeq) protein CHROMATIN REMODELING 5   KO K11367   chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] Organism ccaj  Cajanus cajan (pigeon pea) Brite KEGG Orthology (KO) [BR:ccaj00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ccaj03021]     109816228    03036 Chromosome and associated proteins [BR:ccaj03036]     109816228 Transcription machinery [BR:ccaj03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      109816228 Chromosome and associated proteins [BR:ccaj03036]  Eukaryotic type   Histone modification proteins    HAT complexes     SAGA complex      109816228     SLIK complex      109816228 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SNF2-rel_dom HTH_Hrp3 Helicase_C Chromo CHD1-like_C HDA2-3 ResIII DEAD CHDCT2 SWI2_SNF2 Chromo_MIT1 Motif Other DBs NCBI-GeneID:  109816228 NCBI-ProteinID:  XP_020236740 LinkDB All DBs Position 2:complement(13666387..13686579) Genome browser AA seq 1757 aa AA seqDB search MAFFRNYSNDTVSHGVMEDKSQEQNANRVHRSVGNACTDATSSEKEFDMNMEAQYESEGE PDGSSRLQTETTVDDGDAVKESNLQTGGGWGSTFWKDCGQMGTQNGSESGQESKSGSDYR NADGSEDNSLDGRAGRLDSDDDDGQKEAVKGPRSHADVPAEEMLSDEYYEQDGEEQSDSL HYGGIKKPTGSNSWPQRMSTTVNRTLHRNLRFSDDAEDNDGEDDDDDDDGDNDGDDADYD EEDEADEDDPDDADFEPAASGHAGNKDKDWEGEGSDEDDDSDENIAVSDDDDESFYAKRP KGRQRGKVGQNIKPTRDRKVYAASGRQRRVKSSFEENESTTEDSDSDSDEDFKSTKKRSV HVRKNNGRSSASTGLSTRNSEVRTSSRSVRKVSYVESEESEEADEGKKKKSQKEEVEEDD GDSIEKVLWHQPKGMAEDAQRNNRSTEPVLMSHLFDLEFDWNEMEFLIKWKGQSHLHCQW KSFAELQNLSGFKKVLNYTKKIMDDIRYRRTISREEIEVNDVSKEMDLDIIKQNSQVERI ISDRISKDNSDNVIPEYLVKWQGLSYAEATWEKDIDIAFAQHAIDEYKAREAAMSVQGKT VDSQRKKSKVSLRKLEEQPEWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTV QSVSMLGFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIIYVGTRASREVCQQY EFYNDKRPGKPIKFNALLTTYEVVLKDKAVLSKIKWTYLMVDEAHRLKNSEAQLYTTLSE FSTKNKLLITGTPLQNSVEELWALLHFLDPDKFRSKDEFVQNYKNLSSFNENELANLHME LRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQVSLL NIVVELKKCCNHPFLFESADHGYGGDLGSSDNSKLERIVFSSGKLVILDKLLVRLHETKH RVLIFSQMVRMLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTR AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILER AKKKMVLDHLVIQKLNAEGRLEKKEAKKGGSYFDKNELSAILRFGAEELFKEERNDEESK KRLLSMDIDEILERAEKVEEKEAGAEEGHELLSAFKVANFCNDEDDGSFWSRWIKPDAVF QAEEALAPRSARNIKSYAEVDPSERSNKRKKKEPEPPERVQKRRKAEYSAPAVPMIEGAS VQVRSWSYGNLSKRDALRFSRSVMKYGNESQIDLIAAEVGGGVGAAPPGAQIELFNALID GCTEAVELGNLDIKGPLLDFFGVPVKANDLLTRVQQLQLLAKRIGRYEDPIAQFRVLSYL KPSNWSKGCGWNQIDDARLLLGIHYHGFGNWENIRLDERLGLLKKIAPVELQHHETFLPR APNLKDRANALLEQELAVLGVKNANSRVGRKPTKKERENMINISLRGQEKKKKSGSVNVQ MRKDRFQKPQKVESIVKEEGEMSDNEEVYEQFKEVKWMEWCQDMMVEEMKTLKRLHRLQQ TSANLPKEKVLLKIRNYLQLLGRRIDQIVLDHEEEPYKQDRMTVRLWKYVSTFSHLSGER LHQIYSKLRQEQEEAGIGPSHANGSVSFSRNGNPFRRHMERQRGLKNMTTYQMPEQVNNS GKSEAWKRRRRAESDSHFQGQPPPQRSMSNGIRITDPNSLGILGAGPSDKRFASEKPYRT QPGGFPPRQGFSSGGIK NT seq 5274 nt NT seq  +upstreamnt  +downstreamnt atggctttctttaggaactattcaaatgatacagtctcacatggtgtcatggaagataaa agccaagaacagaatgctaatagagttcatagatcagtaggtaatgcatgtactgatgca acttctagtgagaaagaatttgatatgaacatggaggcacagtatgagagtgaaggtgaa ccggatggttccagtagactgcaaactgagacaacagtcgatgatggagatgctgtaaaa gagtcaaacctgcagactggtggagggtggggttcaacattctggaaggactgtgggcaa atgggcactcaaaatggttctgaatctgggcaggaatcaaaaagtggatcagattataga aatgcagatggatctgaagataattcattggatggaagagcgggaagattagactcagat gatgatgatggacaaaaggaggcagtaaaaggtcccagaagtcatgctgatgttcctgct gaagagatgttgtctgatgagtattatgagcaggatggagaagagcaaagtgactcattg cattatggtggaatcaaaaagcccactggatcaaattcatggcctcaaagaatgtcgact acggtgaatagaactttgcataggaatttgaggttttcagatgatgctgaagataatgat ggtgaagatgatgatgatgacgatgatggtgataatgatggtgacgatgctgattatgat gaagaagatgaagcagatgaagatgatcctgatgatgcagactttgagcctgccgcaagt ggtcatgctggaaacaaggataaggattgggaaggtgaaggctcggatgaagatgatgat agtgatgaaaatatagctgtctcagatgatgatgatgaatctttctatgctaaaagacct aaaggaaggcagcgtggtaaggttggacaaaacataaaacctaccagagatcgcaaagtg tatgctgcatctggtcgacaaagaagagtcaaatcatcttttgaggagaatgagtcaaca acggaggattctgacagtgatagtgatgaggatttcaaaagtacaaaaaagcggagtgtt catgtccgcaagaataatggccgatcttctgcatccacaggtttatctacgcgcaatagt gaggttcgcacttctagtaggtcagttaggaaggtatcatatgttgaaagtgaagaaagt gaagaagctgatgaagggaaaaagaaaaagtcccaaaaggaagaagttgaggaggatgat ggtgactccattgagaaagtgctttggcatcagccaaagggtatggctgaagatgctcaa aggaataatagatcaacagagcctgtattaatgagtcacttgtttgatttggaatttgat tggaatgagatggaatttttgataaaatggaaagggcagtctcatttgcactgtcagtgg aagtcttttgctgagctgcaaaatctcagtggttttaagaaggttttgaattatacaaag aaaataatggatgacatcaggtacaggaggacaatctcaagagaggagattgaggtaaat gatgttagtaaggagatggatttggatattatcaaacagaacagtcaggttgaaagaata atttcagataggatcagcaaagataattctgacaatgttattccagaatacttggttaag tggcaaggactatcttatgctgaagctacttgggaaaaggacattgatattgcttttgca caacatgctattgacgagtataaggctcgtgaggctgctatgtcagttcaaggaaagacg gtagattctcagcgtaagaagagcaaagtaagtttgcggaagcttgaggaacaacctgaa tggttgaagggaggaaagcttcgtgattatcaacttgagggtcttaattttcttgttaac agttggaggaatgatacaaatgtcattttagcagatgaaatgggccttggaaaaactgtt cagtcagtatcaatgcttggttttttacagaatgcccagcaaatccatggacctttcctt gtagttgttcctttgtccactttatcaaactgggccaaagaattcaggaagtggcttcct gatatgaatattatcatatatgttggtactcgtgcaagtcgggaggtttgtcaacaatat gaattttataatgataaaaggcctggaaagccaataaaattcaatgcactgttgactaca tatgaagtagttttgaaggataaggctgttctctccaagatcaaatggacttatctgatg gtggatgaagctcataggctaaaaaatagtgaggcacagttgtatacaacactttctgaa tttagcaccaagaacaagttgcttatcactggtactcctctgcagaacagtgtggaagag ctatgggctttgcttcatttccttgatcctgacaagttcagaagcaaggatgaatttgtt caaaactataagaatctgagttcttttaacgagaatgagctcgcaaatcttcatatggaa ttgagacctcacatacttcgaagagttatcaaagatgtggagaaatcattaccacccaaa attgagcgtatcctaagggttgaaatgtctcctcttcagaaacagtattataagtggatt ttagaacgtaattttcacaatttgaacaaaggagttcgcgggaatcaggtttctcttcta aatattgtggtggaattgaagaagtgctgcaaccatccctttttgtttgaaagcgctgac catggctatggcggggacttgggaagtagtgacaacagtaaactagagaggattgtcttt agcagtggcaagcttgtcatacttgataagctgcttgttagattgcacgaaaccaagcat cgtgttctgattttctctcagatggttaggatgttggatatactgggagagtatatgtca ctacgagggtttcaatttcagagacttgatggaagtacaaaagctgagctgcggcagcag gcaatggatcatttcaatgcacctggtagtgatgacttttgcttccttctttcaacgcga gcaggaggtcttggtatcaaccttgctacagcagacactgtcataatatttgattctgat tggaatcctcaaaatgacctgcaggcaatgagtagagctcatagaattgggcaacaagaa gttgttaacatatatagatttgtgacaagcaaaagtgttgaggaagatattctggaacgt gctaagaagaagatggtgctggaccacttggttattcaaaaactaaatgcagagggtaga ctggagaagaaagaggccaaaaaaggaggaagttattttgataaaaatgagctttctgca atcttacgatttggagcagaggagctatttaaggaagaaagaaatgatgaagaaagcaag aaacgactcttaagtatggatatagatgagattcttgaaagagcagagaaggttgaagag aaggaagctggtgcagaagaaggacatgagttattaagtgcgtttaaggttgcaaatttt tgcaatgatgaagatgatggaagtttctggagccgttggataaagcctgatgctgtattc caagcagaggaagctcttgctcctcgatctgctagaaatattaaaagctatgcagaggtt gatccatctgaaagaagtaataaaagaaaaaagaaggagcctgaaccacctgaacgagtt cagaaacggcggaaagcagagtattctgctcctgcagtaccaatgattgagggggcatct gtccaagtgagaagttggtcatatgggaatttatcaaaaagagatgcactccgtttttct cgttcagttatgaaatatgggaatgagagccaaattgacttaattgctgctgaggttggt ggaggtgttggggcagctccacctggtgcacagattgaacttttcaatgctctaattgat ggttgtacagaagctgtggaacttggaaatctagatataaaggggcctttgctggatttt tttggtgtccctgtgaaggcaaatgatctacttacccgtgttcagcaacttcaacttctg gcaaagcgcattggtcgatatgaagatcctattgcacaatttcgtgttctgtcatatctc aaaccatcaaattggtccaaaggttgtggatggaatcaaattgatgatgctagattgctt cttgggatacattaccatgggtttggtaattgggaaaatattagattagatgaaagactt ggccttttgaaaaaaattgcacccgtagaacttcaacaccatgaaactttcttgccacgt gctccaaatttgaaggaccgtgctaatgcacttttggagcaagaacttgcggttcttggt gtgaaaaatgccaatagcagagttggacggaagcctaccaagaaagagagagaaaatatg attaacatctcactgcgtgggcaggagaaaaagaaaaaatcgggctctgttaatgtccaa atgagaaaagatagatttcagaaaccccagaaggttgaatctatagtaaaggaagagggt gaaatgtctgacaatgaggaagtatatgagcaattcaaggaggtaaaatggatggaatgg tgccaagatatgatggttgaagaaatgaaaactttgaaacgtcttcacaggttgcagcaa actagtgccaatcttccaaaggaaaaggtgcttttgaaaatacgcaactatttacaactt cttgggcgaaggatagatcaaattgtgttggaccatgaagaggaaccctataagcaagat agaatgactgtgcgactgtggaaatatgtctccactttttcccatctttcaggggagagg cttcatcaaatatattccaaacttagacaggagcaagaagaggcggggattggcccttct cacgccaatgggtctgtttcatttagcagaaatggaaacccattccgtcgccatatggag aggcaaagaggattaaagaatatgactacatatcaaatgccagaacaagttaataatagt gggaaatctgaggcatggaaacgacgaagaagagcagaaagtgatagtcatttccagggt cagccgccacctcaaaggagcatgagcaatggaatccggattactgatcctaactcactc gggatcctaggtgctggaccatcggacaaacgctttgctagtgagaaaccttataggaca caacctggtgggtttcctccacgacaaggcttttcttcaggaggtataaagtag

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