Cajanus cajan (pigeon pea): 109816303
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Entry
109816303 CDS
T04868
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03013
Nucleocytoplasmic transport
ccaj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109816303
03015 mRNA surveillance pathway
109816303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109816303
03041 Spliceosome [BR:
ccaj03041
]
109816303
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109816303
Spliceosome [BR:
ccaj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
109816303
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
109816303
NCBI-ProteinID:
XP_020236842
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLMKSQKFAPELEHLVDMTKVNMEVIKPWITRRVTELL
GFEDEVLINFIHSLLDAKEVNGKEVQIQITGFMEKNTGKFMKELWTLLLSAQKNASGVPQ
QFLDAKEEELLKKKAENDRITSEVQRKKDKEGRELMEERLKKLDGGFDSKDNDTASDPTL
RLRDSGFYDRDGKETDKRNGVRARSRHSRSPHSPAVSASPHRGSPSRSMSKSFSNSRSYS
GGRHKSRSVSRSTEARGRSPSSERIRRSPRRRSVSPHRHSPRRSPHRRLPYSRRRSRSRS
SYRSPSPVRRRMHSPFHRSSPSFRRRRSPSPVRRRRSPSPVRRRGSPSPVRRRGSPSPVR
RRGSPSPVRRRGSPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPS
LGHRHRSPSPIGRRRLLSPRRRRSPVTRHRSPSPGRRIPPTNVRHRSDSPMQSPSPIRRR
YGSRTPPHSPSPLRRRSPISGKRRSPSISPQRSPRDDWSSQSPVRRVSPSPIRKDSPRHQ
KSPLQSSMGRVRTQERLSSEANQPSSPLGPIRRDKGGRASHYNSKDSMSTPEKSRIRSVS
PEARSETSSEGRSPHESPVKQRREKLTNERSLSPLKKQRTHKPSIDSPETRAEAEETYYS
RESRDPKMNSSQKISKHSPVSMRKGSPAKYRHEDEFSPEKVAAHPTSEYRHYDNNDGRKT
GRDIKRDKSSGKGSEFPAQQKTSADKETFSREKPHESYAVDIKKSDDKDQSHFAKSSDRH
HKSEATQDLVGKNDRANQSASYDSVSEESGKHRREGKDRRKHKRSEKKYASSDGDYSYDS
ELEDRKEAKKRKKEEKKLRKEEKRRRREERRRRREERRAEKLKMKSKTDYISDDEEAERM
DYHHSDSEETPSEQKKLEIELRNKALESLKAKRGMNN
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggtttctttcgaggcacatccgcggatcaggacactcggttttcgaacaag
caagcgaagctgatgaaatcgcagaagtttgcaccggaattggagcatctggtggacatg
acgaaggtgaatatggaagtaattaagccttggatcacccgaagggtaactgaacttctt
ggattcgaagatgaagtgcttattaacttcatacacagtcttctggatgcaaaggaagtg
aatgggaaagaagttcaaatacaaattactggatttatggaaaaaaatactggaaagttc
atgaaagagctctggacacttcttctcagtgcacaaaaaaatgccagtggtgttcctcag
cagttcttggatgccaaggaagaagaactcctgaagaagaaggccgaaaatgatcggata
acaagtgaagttcagaggaaaaaagataaggaaggtagagagctcatggaagagaggctg
aagaaactggacggtggatttgattccaaggataatgatacagcatcagacccaaccttg
aggctcagggattctggtttctatgatcgtgacgggaaggaaactgacaagaggaatggt
gttagagcaaggagcaggcattctaggtccccacattcacctgcagtttctgcttcacct
caccgaggttcaccttcaaggtcaatgagcaaatcattttcaaattctcgaagttattca
ggtggtagacacaagtcaaggagtgtatccaggtctacagaggctcgaggacgctctcct
tcttctgaaaggattcgccgatctccacgacgacgatctgtttctcctcacaggcattca
ccacgtcgttctcctcataggagattgccttattcaaggagaagatctagatcccgctca
agttacagatctccttctcctgtacgacgtagaatgcattctccattccatcgaagttcg
ccttctttccgtcgacgtagatcaccttctccagtgaggcgacgtagatcaccttctcca
gtgaggcgacgtggatcaccttctccagtgaggcggcgaggatcaccttctcctgtgagg
cggcgaggatcaccttctcctgtgaggcggcgaggatcaccttctccagtgcgacgacgt
agatcaccttctccagtgcgacgacgtagatcaccttctccagtgcgacgacgtagatca
ccttctccagtacgccggcgtagatcaccttctccagtacgccggcgtagatcaccttct
cttgggcatcgacatagatcaccttcacctattggacgacggaggttgctttcacctaga
cgaagaagatctcctgtcactcggcataggtcaccttcaccagggcgtcgaataccacca
accaatgtacgacatagatcagactcccctatgcagtccccctcccctatacgacgaagg
tatggtagtagaactcctccacactctccatctccattgcgacgtaggtctcctatttct
ggtaagagaagatctcctagtatctccccacaaaggtctcctcgagatgattggagttct
cagtctcctgtacggcgtgtatctccatctccgattagaaaagattccccaagacaccaa
aaaagtcctttgcagtcttctatggggagagtcagaacccaagaaagattgtcatctgag
gcaaatcaaccctctagtcctttagggcctatacgaagagataaaggtggcagagcttct
cactataattcaaaagattcaatgtccacacctgagaagtctcgaattcgatctgtatct
ccagaagcaaggagtgagaccagcagtgaagggagaagtcctcatgagagccctgtgaag
caaagaagggaaaaattgaccaatgaaagaagcttgagtcctctgaagaaacaaagaacc
cataaacctagcattgacagcccagagacaagagccgaagcagaagaaacatactattcc
agagaaagcagagatcctaaaatgaattcatcacaaaagatatcaaaacattccccggtt
agtatgcggaaaggttcacctgcaaaatatcgtcatgaggatgagttttctcctgaaaag
gtggcagctcatccaacttctgaatatcgtcattatgataataatgatgggagaaagaca
ggccgggatataaaacgtgataaatcttctggaaagggcagtgaatttcctgctcaacag
aagacatcagcggacaaagaaactttttcccgggagaagcctcatgaatcctatgctgta
gatattaagaaatcagatgacaaggaccaatcccattttgccaaaagtagtgaccggcac
cacaaatctgaagccactcaagatctagttggaaaaaatgatcgtgccaatcagagtgct
tcatatgattctgtttctgaggagagtggtaagcatagacgggagggaaaggataggaga
aagcataaaaggtctgagaaaaagtatgcgtcttccgacggagattatagttatgattct
gagttagaggacaggaaagaagctaagaagaggaaaaaagaggagaagaagctgcggaag
gaggagaagcgtcgaagacgtgaggagaggcgtcgcagaagggaagaacggcgtgcagag
aagctgaaaatgaagagtaaaacagactatatttcagatgatgaggaagctgaacgaatg
gattatcatcacagtgatagtgaagagacaccatctgagcaaaagaagcttgagattgaa
ttacggaacaaggctcttgaatccctcaaagcaaagaggggcatgaataactaa
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