Cajanus cajan (pigeon pea): 109816331
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Entry
109816331 CDS
T04868
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109816331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109816331
Spliceosome [BR:
ccaj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
109816331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
109816331
NCBI-ProteinID:
XP_020236873
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MSTKREREAVDRVEDEGLDNESKRQRLDDDSSPSPPPVSIANPLSGLANNYADIDEEEDY
VRRERGSVNERRNDGSQHNGHKYGEADDSDEEDDSREQFSGRNNRQVEVRKDCPYLDTVN
RQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKV
YCLPDGYEINDPSLDDIRHVLNPRFTAKEVEQLDKNKQWSRALDGSSYLPGMVGLNNIKE
TDFVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLVHRFGELTRKIWHARNFKGQVSPHEF
LQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLKTSKKNTSIIYECFQGELEVVKEIP
NKVIADKKENNEDQNNGKKLSDGVNERYAFVKETSKMPFLMLGLDLPPPPLFKDVLEKNI
IPQVPLFNILTKFDGETVTEVVRPHIARMQYRVTRLPKYMILHMRRFTKNNFFVEKNPTL
VNFPVKNLELKDYIPLPAPKENEKLRSKYDLIANVVHDGKPGEGFYRVFVQRKSEELWYE
MQDLHVSETLPHLVALSEAYMQIYEQQQ
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtccacaaaaagggaaagggaagctgttgatagagtagaggatgaagggcttgataat
gagtcaaaaaggcagaggctagatgacgattcctccccctctccacctcctgtctccatt
gcaaatcctctttctgggttggccaataattatgctgacattgatgaggaggaagattat
gttagaagggaaaggggttctgttaatgagaggaggaatgatggatcccagcataatgga
cataaatatggagaggctgatgatagtgatgaagaagatgattcacgtgaacaatttagt
ggaagaaacaatcgccaggttgaggttcggaaggactgtccttatcttgatactgttaat
agacaggttttggattttgactttgagaaattctgttctgtctccctgtccaatttaaat
gtgtatgcatgtttggtttgtgggaagtattaccaagggagagggaagaagtctcatgca
tatacacatagtctggaagcaggacaccatgtttatatcaatctccggactgaaaaagtc
tactgtcttcctgatggttatgaaattaatgacccttctttagatgacattcggcatgtc
ttaaatccaagattcactgcaaaagaagttgaacaacttgacaaaaataagcagtggtct
agggctcttgatggttctagttaccttcccggaatggtgggacttaataatatcaaggag
actgattttgtaaatgtaacaattcaatcattaatgagagttacccccttgaggaatttt
ttccttatccctgaaaattatcaacactgcaaatctccacttgttcatcgatttggtgaa
ctcactaggaagatctggcatgcacggaactttaaaggacaggtcagcccacatgagttt
ctacaagcagtgatgaaggccagtaaaaaaaggtttcggataggtgcacaatctgaccca
gttgagttcatgtcttggcttcttaataccctgcatgcagatcttaagacttcaaagaag
aataccagcatcatctatgagtgttttcagggtgaacttgaggttgtgaaagagattcct
aacaaagtgatagcagataagaaagagaacaatgaagaccaaaacaatggcaagaaactt
tctgatggggtaaatgaacgatatgcatttgtcaaagaaacttcaaaaatgccatttcta
atgttagggttggacttgccaccaccacctcttttcaaggatgtgttggaaaaaaatata
ataccacaggttccactcttcaacatactaaccaagtttgatggtgagactgtcacggag
gtggtccgtcctcatatagcaaggatgcagtatcgtgttaccagattgcctaagtatatg
attcttcacatgcgtcggtttactaagaataacttttttgtggaaaaaaatcctacattg
gtcaactttcctgtgaagaacctagagttgaaggattacattcccttgccagcaccaaaa
gaaaatgagaaactgcgatctaaatatgatttaattgctaatgttgttcatgatggcaaa
cctggtgaaggattctatagggtattcgtgcaacgcaaatcagaagaactttggtatgag
atgcaggatttgcacgtctctgaaacacttccgcatttggttgcactttcagaagcttat
atgcagatttatgaacagcagcagtaa
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