KEGG   Cajanus cajan (pigeon pea): 109816337
Entry
109816337         CDS       T04868                                 
Name
(RefSeq) DNA mismatch repair protein PMS1
  KO
K10858  DNA mismatch repair protein PMS2
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03430  Mismatch repair
ccaj03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    109816337
   03460 Fanconi anemia pathway
    109816337
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccaj03400]
    109816337
DNA repair and recombination proteins [BR:ccaj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     109816337
SSDB
Motif
Pfam: DNA_mis_repair MutL_C HATPase_c_3 HATPase_c Herpes_UL49_1
Other DBs
NCBI-GeneID: 109816337
NCBI-ProteinID: XP_020236909
LinkDB
Position
2:complement(23697274..23703902)
AA seq 947 aa
MVVEAQIIKPISKGIVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDFGEQWFQ
VIDNGCGISPNNFKVLALKHHTSKLAEFHDLQSLTTFGFRGEALSSLCALGNLTVETRTV
SEPVATHLTFDNSGVLVAERKTARQIGTTVMVKKLFFNLPVRSKEFSRNIRREYGKLVSL
LNAYALIAKGVRFVCTNTTGKNVRSVVLKTQGSGSLKDNVITVLGMNTFSCLEPVTLSIS
DSCKVEGFLSKSGQGNGRNLGDRQYFFVNGRPVDMPKVSKLVNELYKSANSKQYPIAVLN
FTVPTRAYDVNVTPDKRKIFFSEETAILQALREGLQQIYSASNICYSVNEVMLPAQKEEC
LELCSSHGKSPVIMKLPFLNGSPPQEEDCTECNSGSVSPEKLSSECNNDRISQDEHKEKL
VTDLKNASESINEYQYSRVEEGLNCENNGCLTNQGFTLRAHSSSKDNKSGRQSARPGSVM
HDQATLVSRTVENGSTSSKDLFNHSRHVQSTLNNFVSVNKRNRDGVHRTLSEVPVLRNQA
PQCQLKTANTEKHDLITRSSSLCFDQIDEPSRVNEIESLKQLSPDNVFHRNENSDSFRVD
SSDGDPKSKMGLDLKNNTPLVDTASIPSSSNDLITTDVLASDPTLHSSPVWLDSSKPSGL
KICSNMQFSFQDLKKRRDKRLSLLQSSKYGCGKAKVKSRYSAATLQLPQTEAGDQKERVL
AAAATELERFFKKEDFSRMKVIGQFNLGFIIGKLDKDLFIVDQHAADEKYNFERLSQSTI
LNQQPLLRPIKLELSPEEEIVASMHLDIIRKNGFTLEEDPNAPPGCRFKLKSVPFSKNIM
FGIEDVKELISTLSDGDGHVECSLVGSYKLDTSDSLCPSRVRAMLASRACRSSIMVGDAL
GRNEMQKILDHMAELKSPWNCPHGRPTMRHLVDLTKIQKSSESTMLM
NT seq 2844 nt   +upstreamnt  +downstreamnt
atggtagttgaagctcaaatcatcaagcctatcagcaaaggcatcgttcacagaatctgc
gccggtcaagtaatcctcgacctctcttccgccgtcaaggaactcgtcgaaaacagcttg
gacgccggcgccaccagcatcgaaatctccctcaaggacttcggcgaacaatggtttcag
gtcatcgacaacggttgcggcatttcccccaacaatttcaaggttcttgcgctgaagcat
cacacatcaaagttagcggagtttcacgatcttcagtctctgaccactttcggcttccga
ggggaggctttgagttcgctttgcgctttggggaacttgaccgttgaaacgagaacggtg
agcgaaccggtcgctacgcacttgactttcgacaattccggtgttcttgtggcggaaagg
aaaactgcacggcaaattggtaccactgttatggttaaaaagttgttcttcaatttgcct
gttcgaagcaaagagtttagtcgtaacatacgtagggaatatggcaagttggtttctctg
ttgaatgcttatgcccttatagcgaaaggtgttcgttttgtgtgcactaacacgactggc
aaaaatgtgaggtctgtggttcttaagacgcaaggaagtggttcgctaaaggataatgtc
ataacggttcttggcatgaacactttcagctgcttagagcctgtgacattgtctatatct
gattcttgcaaagttgaaggttttctttccaagtctggacagggtaatggacgtaatttg
ggggatagacagtatttttttgtgaatggtagaccggtcgatatgcctaaagttagcaaa
cttgtgaatgagttgtataaaagtgcaaactccaaacagtatcccattgctgttttgaat
tttacggttcctacaagggcgtatgatgtcaatgtgactcctgataagagaaagatattt
ttttctgaagaaactgctatattgcaagccctgagagagggattacagcagatttattct
gctagcaatatctgctactctgttaatgaagttatgctgcctgctcaaaaagaagagtgt
cttgagttgtgttcatctcatgggaagtctcctgtgataatgaagcttccattcttgaat
ggcagccctccacaggaagaggattgtactgaatgcaacagtggtagtgtttctccagaa
aagcttagttctgagtgcaacaacgatagaatttctcaggatgagcacaaggagaaactt
gttactgatttaaaaaatgcttctgaatctattaatgaatatcagtactcacgagttgaa
gaaggattgaattgtgagaacaatgggtgtttaacgaaccaagggttcacactcagagcg
cacagctcttcaaaggataacaagagtggaagacagtcagcacgtcccggtagtgttatg
catgatcaagctacccttgtctcaagaacagttgagaatgggagcacttctagtaaagat
ttatttaatcattcaagacatgttcagtccactcttaacaattttgtttctgtaaataaa
agaaatcgtgatggtgtccatagaaccttatctgaagtgccagtccttagaaatcaagct
cctcaatgtcaattgaagactgcaaatactgaaaaacacgacttgattacaagatcatca
tcactttgttttgaccaaattgatgaaccttctagggtgaatgagattgaatctttgaag
caacttagtcctgataacgtctttcacagaaatgaaaattcagattcttttagagttgac
tcctctgacggagatcctaaatctaaaatgggattagatctaaagaataatacacctctg
gtcgatacagcatcaattccttcttctagcaatgatttgatcactacagatgttttggcc
tcagaccctacattacattcatcgcctgtatggttagattcttctaagccttctggtctg
aagatatgctccaacatgcaattttcttttcaagatcttaagaaaaggagagacaagaga
ctttctctattgcaatccagtaaatatggatgtggaaaagctaaagtcaaaagtcgctat
tcggctgcaactttgcagcttccacagacagaagctggagatcagaaagaaagggtgttg
gcagcagcagctacggaacttgaaaggtttttcaagaaggaagactttagcagaatgaag
gtgattgggcaattcaatcttggatttatcattggtaaattggataaagatttattcatc
gtggatcagcatgctgcggatgagaagtataattttgagcgcctatcacaatcaaccatc
ttgaaccaacaacctcttcttaggcctataaaactggagttatcccctgaagaagagata
gttgcttcaatgcacttggacataatcaggaagaatggatttactttggaagaggatcca
aatgcaccacctggatgccgttttaaattaaagtctgtcccattcagtaaaaacattatg
tttggaattgaagatgttaaggagctgatctctaccctgtctgatggtgatggtcatgtg
gaatgttccctcgttggtagctataaactggacacctcagattctctttgcccttcaaga
gttcgagcaatgttggcatcgcgtgcatgtcgatcatcaattatggttggtgatgcactt
ggaagaaatgaaatgcagaagatacttgatcatatggctgagctgaaatccccatggaat
tgtccccatggcagaccaaccatgcgccatttagttgacttgacaaaaattcaaaagagc
tctgaaagtacaatgctgatgtaa

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