Cajanus cajan (pigeon pea): 109816337
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Entry
109816337 CDS
T04868
Name
(RefSeq) DNA mismatch repair protein PMS1
KO
K10858
DNA mismatch repair protein PMS2
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03430
Mismatch repair
ccaj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109816337
03460 Fanconi anemia pathway
109816337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccaj03400
]
109816337
DNA repair and recombination proteins [BR:
ccaj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
109816337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Herpes_UL49_1
Motif
Other DBs
NCBI-GeneID:
109816337
NCBI-ProteinID:
XP_020236909
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Position
2:complement(23697274..23703902)
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AA seq
947 aa
AA seq
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MVVEAQIIKPISKGIVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDFGEQWFQ
VIDNGCGISPNNFKVLALKHHTSKLAEFHDLQSLTTFGFRGEALSSLCALGNLTVETRTV
SEPVATHLTFDNSGVLVAERKTARQIGTTVMVKKLFFNLPVRSKEFSRNIRREYGKLVSL
LNAYALIAKGVRFVCTNTTGKNVRSVVLKTQGSGSLKDNVITVLGMNTFSCLEPVTLSIS
DSCKVEGFLSKSGQGNGRNLGDRQYFFVNGRPVDMPKVSKLVNELYKSANSKQYPIAVLN
FTVPTRAYDVNVTPDKRKIFFSEETAILQALREGLQQIYSASNICYSVNEVMLPAQKEEC
LELCSSHGKSPVIMKLPFLNGSPPQEEDCTECNSGSVSPEKLSSECNNDRISQDEHKEKL
VTDLKNASESINEYQYSRVEEGLNCENNGCLTNQGFTLRAHSSSKDNKSGRQSARPGSVM
HDQATLVSRTVENGSTSSKDLFNHSRHVQSTLNNFVSVNKRNRDGVHRTLSEVPVLRNQA
PQCQLKTANTEKHDLITRSSSLCFDQIDEPSRVNEIESLKQLSPDNVFHRNENSDSFRVD
SSDGDPKSKMGLDLKNNTPLVDTASIPSSSNDLITTDVLASDPTLHSSPVWLDSSKPSGL
KICSNMQFSFQDLKKRRDKRLSLLQSSKYGCGKAKVKSRYSAATLQLPQTEAGDQKERVL
AAAATELERFFKKEDFSRMKVIGQFNLGFIIGKLDKDLFIVDQHAADEKYNFERLSQSTI
LNQQPLLRPIKLELSPEEEIVASMHLDIIRKNGFTLEEDPNAPPGCRFKLKSVPFSKNIM
FGIEDVKELISTLSDGDGHVECSLVGSYKLDTSDSLCPSRVRAMLASRACRSSIMVGDAL
GRNEMQKILDHMAELKSPWNCPHGRPTMRHLVDLTKIQKSSESTMLM
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggtagttgaagctcaaatcatcaagcctatcagcaaaggcatcgttcacagaatctgc
gccggtcaagtaatcctcgacctctcttccgccgtcaaggaactcgtcgaaaacagcttg
gacgccggcgccaccagcatcgaaatctccctcaaggacttcggcgaacaatggtttcag
gtcatcgacaacggttgcggcatttcccccaacaatttcaaggttcttgcgctgaagcat
cacacatcaaagttagcggagtttcacgatcttcagtctctgaccactttcggcttccga
ggggaggctttgagttcgctttgcgctttggggaacttgaccgttgaaacgagaacggtg
agcgaaccggtcgctacgcacttgactttcgacaattccggtgttcttgtggcggaaagg
aaaactgcacggcaaattggtaccactgttatggttaaaaagttgttcttcaatttgcct
gttcgaagcaaagagtttagtcgtaacatacgtagggaatatggcaagttggtttctctg
ttgaatgcttatgcccttatagcgaaaggtgttcgttttgtgtgcactaacacgactggc
aaaaatgtgaggtctgtggttcttaagacgcaaggaagtggttcgctaaaggataatgtc
ataacggttcttggcatgaacactttcagctgcttagagcctgtgacattgtctatatct
gattcttgcaaagttgaaggttttctttccaagtctggacagggtaatggacgtaatttg
ggggatagacagtatttttttgtgaatggtagaccggtcgatatgcctaaagttagcaaa
cttgtgaatgagttgtataaaagtgcaaactccaaacagtatcccattgctgttttgaat
tttacggttcctacaagggcgtatgatgtcaatgtgactcctgataagagaaagatattt
ttttctgaagaaactgctatattgcaagccctgagagagggattacagcagatttattct
gctagcaatatctgctactctgttaatgaagttatgctgcctgctcaaaaagaagagtgt
cttgagttgtgttcatctcatgggaagtctcctgtgataatgaagcttccattcttgaat
ggcagccctccacaggaagaggattgtactgaatgcaacagtggtagtgtttctccagaa
aagcttagttctgagtgcaacaacgatagaatttctcaggatgagcacaaggagaaactt
gttactgatttaaaaaatgcttctgaatctattaatgaatatcagtactcacgagttgaa
gaaggattgaattgtgagaacaatgggtgtttaacgaaccaagggttcacactcagagcg
cacagctcttcaaaggataacaagagtggaagacagtcagcacgtcccggtagtgttatg
catgatcaagctacccttgtctcaagaacagttgagaatgggagcacttctagtaaagat
ttatttaatcattcaagacatgttcagtccactcttaacaattttgtttctgtaaataaa
agaaatcgtgatggtgtccatagaaccttatctgaagtgccagtccttagaaatcaagct
cctcaatgtcaattgaagactgcaaatactgaaaaacacgacttgattacaagatcatca
tcactttgttttgaccaaattgatgaaccttctagggtgaatgagattgaatctttgaag
caacttagtcctgataacgtctttcacagaaatgaaaattcagattcttttagagttgac
tcctctgacggagatcctaaatctaaaatgggattagatctaaagaataatacacctctg
gtcgatacagcatcaattccttcttctagcaatgatttgatcactacagatgttttggcc
tcagaccctacattacattcatcgcctgtatggttagattcttctaagccttctggtctg
aagatatgctccaacatgcaattttcttttcaagatcttaagaaaaggagagacaagaga
ctttctctattgcaatccagtaaatatggatgtggaaaagctaaagtcaaaagtcgctat
tcggctgcaactttgcagcttccacagacagaagctggagatcagaaagaaagggtgttg
gcagcagcagctacggaacttgaaaggtttttcaagaaggaagactttagcagaatgaag
gtgattgggcaattcaatcttggatttatcattggtaaattggataaagatttattcatc
gtggatcagcatgctgcggatgagaagtataattttgagcgcctatcacaatcaaccatc
ttgaaccaacaacctcttcttaggcctataaaactggagttatcccctgaagaagagata
gttgcttcaatgcacttggacataatcaggaagaatggatttactttggaagaggatcca
aatgcaccacctggatgccgttttaaattaaagtctgtcccattcagtaaaaacattatg
tttggaattgaagatgttaaggagctgatctctaccctgtctgatggtgatggtcatgtg
gaatgttccctcgttggtagctataaactggacacctcagattctctttgcccttcaaga
gttcgagcaatgttggcatcgcgtgcatgtcgatcatcaattatggttggtgatgcactt
ggaagaaatgaaatgcagaagatacttgatcatatggctgagctgaaatccccatggaat
tgtccccatggcagaccaaccatgcgccatttagttgacttgacaaaaattcaaaagagc
tctgaaagtacaatgctgatgtaa
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