Cajanus cajan (pigeon pea): 109816401
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Entry
109816401 CDS
T04868
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109816401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109816401
04121 Ubiquitin system [BR:
ccaj04121
]
109816401
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109816401
03400 DNA repair and recombination proteins [BR:
ccaj03400
]
109816401
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
109816401
Ubiquitin system [BR:
ccaj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
109816401
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
109816401
DNA repair and recombination proteins [BR:
ccaj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
109816401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
BRCT_2
BRCT
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
zf-RING_5
zf-HC5HC2H_2
zf-RING_10
RTT107_BRCT_5
PHD_NSD
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
109816401
NCBI-ProteinID:
XP_020236999
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
MGDLERMGRELKCPICWSLLDSAVSLTCNHLFCNSCIFKSMKSASACPVCKIPFTRREVR
PAPHMDNLVSIYKNMEAASGINIFVTQNAPVTKLSDEEKQCEGGADNSDNVEAGETHKSH
ARGKKTVKRKKSKTVQTSTEGSGSGYDFAKPSFPAKKRVQVPQNILSETPLKNVKVGDSV
GDINKEGTEKVSVMEDERPLQSEKCDPVLSPFFWLREEKDGEKLSQPTDEDQVIDGLTPN
PPSFSDLKDSDDENPPSDEVLNKSAVNLFDSDMFEWTQRPCSPELFSSPSKMQVKDTYED
DENQEELVAATMELDANQASADSDNIKLENLKEGNRLVDALPPSMSPPHIRSMDDLNGKK
RSTKRGRKAREKIRQDQIGEPKNSIDRMHVDSNISIEVSHEQALNSNHKSSYLGKVTRMA
KRVCFSTSSIPTPITACTVPSTLGGLGNSDMKIAKNSNTSLCKQENEKQCPQEIALKGHM
KRSGKQNIDQTNEFAGSASSIFSLQTDHNGKTSSNRKQSKKKFSRKSMSCSKEFRTTKKP
KLSSDCISKTKNGVEILPNESIHQGPEVRNLNNTSKEKHCSLMDETFLKKCGSHVKKYQC
VFCHSSEESEVSGPLVHYLDGKPVTADYEEGSKVTHCHRNCTEWAPDVYFDGDDAINLEA
EICRSRRIKCSFCGLKGAALGCFEKSCRRSFHVPCAKWTSQCRWDTQNFVMLCPLHSSSM
LPCEGSGSQKRSKKCTAREGKNHGPEHDTTSQSRTAHRSYKKIVLCCSALSVQERKVVSE
FERVSKVTVLKDWDSSVTHVIASTDENGACKRTLKVLLGILEGKWILNIEWIKACLKEKD
PVDEEWYEINADIHGIRDGPRLGRLRVLNKHPKLFDGYKFYFMGDFIPSYKGYLQELVVA
AGGIILHRKPVSGDQESMLPDMHPYQTVIIYSLEIPDKCKPSKEDTICSQRRHVAEVLAS
STGSKVASNTWILNSIAACKLQCLGQ
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgggggatttggagcgaatgggaagagaactgaaatgtccgatctgttggagtttgctc
gattccgcggtttcgcttacctgcaaccatcttttctgcaactcctgtatattcaagtcc
atgaaatcagcctctgcgtgtcccgtctgtaaaattcctttcacgcgccgagaggttcgt
cctgcgcctcacatggacaacttggtcagcatatataaaaacatggaagctgcttcggga
attaatatatttgtcacccagaatgcacctgttactaaattatcagatgaagaaaagcaa
tgtgaaggtggtgctgacaactctgacaacgtggaagctggtgagactcataaaagtcat
gcacgggggaagaaaaccgttaagagaaagaagtcgaagacagttcagaccagcacggaa
ggttcaggctctggttatgactttgcaaaaccttcttttcctgcaaagaaaagggtgcag
gtgccgcaaaatattctttcagaaactccgttaaagaatgtgaaggttggagactctgtt
ggtgacattaacaaagagggaactgaaaaggtgtcagttatggaagatgaaaggcctctc
caaagtgaaaaatgtgatcctgttctttcaccattcttttggttgagagaggaaaaagat
ggtgaaaagttgagtcaaccaactgatgaggatcaagttattgacggcttaacaccaaac
cctccctcattcagtgatctcaaggactctgatgatgaaaatcccccgtcggatgaggtg
ctaaataaaagtgctgttaatttatttgatagtgatatgtttgaatggacacagaggcct
tgctctcctgaattgttttcaagtccctccaaaatgcaggtcaaagatacttatgaggat
gatgaaaatcaagaggaattggtggctgccacaatggagctggatgcaaatcaggcaagt
gctgattctgacaacataaaacttgagaatctcaaagaaggaaacagattggttgatgca
ttaccaccgagtatgtctcctcctcacattagaagtatggatgatctaaatggaaagaaa
aggtctacaaaaagaggcagaaaggctagggaaaaaattaggcaagatcagattggggaa
ccaaagaattcaattgacagaatgcatgttgattcaaatatatcaatagaagtctctcat
gaacaagcattgaactctaatcacaaatcttcttatttggggaaggttactagaatggcc
aagagggtttgtttcagtaccagttccattccaacacctataactgcttgtacggttccc
agcacattaggaggtttaggcaatagtgacatgaagatcgctaagaattcaaatacttca
ctatgtaaacaagaaaatgagaagcaatgtcctcaggagattgctctaaaaggccatatg
aagaggtctggaaaacaaaatattgaccaaaccaatgagtttgctggttctgcttcatcc
atttttagtctgcagacagatcataatgggaagacctcatctaatagaaagcaaagcaaa
aagaagttttccagaaaatctatgtcctgcagtaaagaattcagaactactaaaaagcca
aaactttcctctgattgtatctccaagactaaaaacggtgtagaaattctacctaatgaa
agtattcatcaaggtccggaagttaggaatttgaataatacatcaaaagaaaagcattgt
tctttgatggatgaaacatttttaaagaaatgtgggagtcatgtaaaaaagtatcaatgt
gttttctgtcactcatcagaagaatcagaggtttctggccctttggtgcattaccttgat
ggcaagcctgtaactgcagattatgaagaggggtctaaagtaactcattgtcacaggaac
tgcacagaatgggcccccgatgtatactttgatggtgatgatgcaataaatcttgaagct
gaaatttgtagaagtcgaagaattaaatgtagtttctgtggacttaaaggggctgcactt
ggttgttttgagaaaagttgtcgccggagctttcatgttccttgtgccaaatggacttct
caatgtcgatgggatacgcaaaatttcgtcatgttatgccctctgcattcttcctccatg
ttgccctgtgaaggttctggatcccaaaaaaggagcaagaaatgcacagctagagaggga
aaaaaccatggtcctgaacatgacactacaagccaaagtcggactgctcatagatcatac
aagaaaattgtactatgttgttctgctctatccgtacaggagaggaaagttgtttctgaa
tttgaaagagtatccaaggttacagtcttaaaagattgggactcaagtgttacccatgtt
atagcttccacggatgaaaatggggcatgcaaaaggaccctcaaggtattgttgggtatc
ttggagggaaagtggattctcaatattgaatggatcaaagcttgcttgaaggaaaaggat
cccgttgatgaagagtggtatgaaattaatgctgacatccatggaattagggatggtcct
cgtcttggacgactaagagtattgaacaagcatccaaagctttttgatggctacaagttt
tactttatgggagattttataccttcatacaaggggtatctgcaagaacttgtggttgct
gctggagggataattttgcacagaaaaccagtgtctggtgaccaagagtcaatgttacca
gatatgcatccataccaaaccgtcataatttacagcctcgagattcctgataaatgtaag
ccttcgaaagaggatacaatttgcagccaaaggcgccacgttgcagaggttctagcaagt
tctacaggttcaaaggtagcaagtaatacatggattctgaattcaattgcagcctgcaaa
ctgcaatgccttggtcaatga
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integrated database retrieval system
