Cajanus cajan (pigeon pea): 109816454
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Entry
109816454 CDS
T04868
Name
(RefSeq) recQ-mediated genome instability protein 1 isoform X1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
109816454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccaj03400
]
109816454
DNA repair and recombination proteins [BR:
ccaj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
109816454
FA (Fanconi anemia) pathway
109816454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Cas_Csm6_CARF
Motif
Other DBs
NCBI-GeneID:
109816454
NCBI-ProteinID:
XP_020237071
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MPVRRLRLDSDSDEEQQHPLQPRPVEISDDDDDDFIDVADSLSPPSPASACPISDHLRRL
GLSLRRDWLASCLLQLQSSVAAFQRLDAAAKAKLCFEHFLFADMNSCGAGVLPPDVDSMH
LRLLPGPYVLQVDEVINICCPLRGRYEAAPAGLKRCLKLSMTDGVQRVFGMEYRPIKALE
VCASSGSKVVISNVHVRRGLLMLVPETIVILGGLVEQLDAARKRLVEEINKPPRGKRTKN
GVLPPLATRATLAAWPSGGVDDLGRSGFMPHGSHSVQENNQGASLSMSGTGNSLTTEDTV
SMGAQNTASNSILHMASNAEAINMNMRRDSNPVSRVSPMANQLSSVISKAEEMHIDAANL
TRETSVDNHTSHMDSNVAAAHMDSVHIARESYAATECTPIVENVETDRDRTHVATDSARL
RRSSPAFLNVAATHKDTVHITRESSVVMECSPIVENVDTDRDRTHLATDTAHPRRSSPTI
LNTSDVDMVDASDHPLIMSGDQEVPFTYLASLSAKLAAMKEGAPFVRGKIKCFLTGVKGF
QYKKRATYELQAYVDDGSLISEILIDHDVVQKGIGYSPMEVTAALSSHDTKIVQQMKDTM
RKFQAFLANFEGIILVELNKKSSLPLALEMSQGCPQSDAWLLLRRLKSLHPPQVQEHFSS
DPIELSP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttcgccgcctcaggctcgattccgactccgacgaagaacaacaacatccactt
cagccacgtcccgtcgaaatctccgacgacgacgatgacgacttcatcgacgtcgccgat
agcctctctcctccctctcccgcctccgcctgtccaatctccgaccacctccgccgcctc
ggactgtccctcaggcgtgactggctcgcttcctgccttctccaactccaatcctccgtc
gccgccttccaacgcctcgacgccgccgccaaagccaagctctgcttcgagcactttctc
ttcgccgacatgaactcctgcggcgccggtgtactccctcccgacgtcgattccatgcac
cttcggcttctccccggtccctacgtgttgcaggttgatgaagttatcaacatctgttgt
cctctgcgaggcagatatgaagcggcacctgctggactcaaaaggtgcctcaagttgtct
atgactgatggcgttcagagagtctttggaatggagtataggcctatcaaagctcttgaa
gtttgtgcatcttctggttcaaaggttgtcatctctaatgtacatgtgcgtcgcggactt
ctgatgctggtccctgaaaccattgtaattttggggggattggttgagcagctggatgca
gctcgaaaacggttggttgaagaaataaataaaccacctagggggaaaagaaccaaaaac
ggagtgcttcctcctttagcaactagagctactcttgctgcatggccttcaggtggagtt
gatgatcttgggcgcagtggcttcatgccacacggttcacattctgtccaggaaaacaat
caaggtgctagcctgagcatgtctggcactggtaacagcttaacaactgaagatactgtg
tccatgggtgcacaaaatactgcttctaattctatactccacatggcatccaatgctgag
gccataaatatgaatatgcgtagggatagtaatcctgtttcccgtgtgagtccgatggct
aaccagctctcttctgtcatctcaaaggctgaggagatgcatatagatgctgctaacctc
accagggaaacttctgttgacaatcacacttctcacatggattcaaatgttgcagcagca
catatggactctgttcatatagcaagagaaagttatgcagctaccgagtgcactcccatt
gttgaaaatgttgagacagacagggatagaactcatgtagcaactgatagtgctcgtctg
agaagatcctcccccgcctttttaaatgttgcagcgacacataaggacactgttcatata
acaagagaaagttctgtggttatggagtgctctcccattgttgaaaatgttgacacagac
agggatagaactcatctagctacagatactgctcatccaagaagatcctcccccaccatt
ttaaacactagcgatgtcgacatggttgatgccagtgaccatccactcattatgtctgga
gaccaagaggttcctttcacatacttagctagtttgtctgccaagttggctgcaatgaag
gagggagctccttttgttcggggtaaaatcaagtgctttttgactggtgtaaaaggattc
cagtataagaaaagggcaacttacgagcttcaggcatatgtagacgatggtagccttatt
tctgaaatcctcattgatcatgatgtggtacagaaaggaattggttattctcctatggag
gtaaccgccgctctttcttctcatgacacgaaaattgtccaacaaatgaaggatacaatg
cgtaaatttcaagcttttttagcgaactttgagggaataatacttgtggaattaaataaa
aaatcttcccttccccttgcactagagatgagtcaaggctgtcctcaatctgatgcatgg
ttacttctgagaaggctgaagtctcttcaccctccacaagttcaagaacatttttcttcg
gatccaattgaattatccccataa
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