Cajanus cajan (pigeon pea): 109816483
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Entry
109816483 CDS
T04868
Name
(RefSeq) protein CHROMATIN REMODELING 25 isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109816483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccaj03400
]
109816483
DNA repair and recombination proteins [BR:
ccaj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
109816483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
109816483
NCBI-ProteinID:
XP_020237118
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MEEEEDEGVWCSSDSGDDDVEERKSQNVDALIRGNLIVKRQSLLPRVLSVSQGAAVCRKP
FKPPCSKSDASGYNQDLTRRLSARKRFVPWGSSSALPRPALEELKLNVPVSVTESHVEEV
KLSLPPGIDPLVLWQWHPQDSDNGPPEANFTTITVDPFLVRFLRPHQREGVQFMFDCVSG
LCTSPNIHGCILADDMGLGKTLQSITLLYTLICQGFDGKPMVRKAIIVTPTSLVSNWEAE
INKWVGERVRLVALCESTREDVISGIDNFISPQSNLQVLIVSYETFRMHSSKFSSSGSCD
LLICDEAHRLKNDQTITNRALAALPCKRRILLSGTPLQNDLEEFFAMVNFTNPGILGDIA
HFRRYYEAPIICGREPAAPPEEKKLGAERSAELSVNVNRFILRRTNALLSNHLPPKIVEV
VCCKLTPLQSDLYKHFIQSKNVKRAISEERKQSKILAYITALKKLCNHPKLIYDTIRNGS
PGTSGFEDCIRFFPPEMLSGRSGSWTGGHGAWVELSGKMHVLARLLAHLRQRTNDRIVLV
SNYTQTLDLFSQLCRERRYPHLRLDGTTSISKRQKMVNCFNDPSKDEFVFLLSSKAGGCG
LNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKE
GLQKVIQQGQTDSLVAQANFLSTEDLRDLFTFHANIKSEIHEKMQCSRCQTFDGLQSTEG
QSTTTDSESDGETSDIGGFAETAGCLQNLKRSEKQVGSPLEEDLGSWGHHFFPTSVPDAI
LQASAGDEVTFVFSNQVNGRLVPIESNISPKVQQKELLKSKQNGKQKPMPFSLHNRLPPQ
SASGIASNSMSSSTPNAWTKETLNSIGITKNISMNVAFETNYSLAGNILPLKRSCPANIN
DDNFE
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaggaagacgaaggggtttggtgttcttctgattcgggcgacgatgatgtc
gaagaacggaaatcgcagaatgtggatgccctgatcaggggcaacctcatcgtgaagaga
caatcgttgctaccgcgagttctatcagtttcgcaaggagccgctgtttgtagaaaaccc
tttaaacctccgtgctctaaatctgatgcttctggttacaatcaagacctcactcgtagg
ctttccgctcgcaaaaggtttgttccctggggttcttcctctgctcttcctagacctgcg
ttggaggagttgaaattgaacgtaccagtctcggtcaccgaaagccatgtcgaggaggtc
aaactctctttgcccccgggtattgatcctcttgtattgtggcaatggcaccctcaagac
tccgacaatggccctcccgaagctaatttcaccaccataacagttgacccctttcttgtt
cgtttccttcgtccacatcagagagaaggggttcagttcatgtttgattgtgtctcgggg
ctgtgtacctcaccaaatatacatggatgcattttggcagatgatatgggtttagggaag
acattgcagtcgatcacattactatatactctaatttgtcaagggtttgatggcaagccg
atggttcgaaaggccatcattgtgactccgaccagccttgtcagcaattgggaagccgaa
atcaacaagtgggttggagaaagagttcgtcttgttgctctatgtgaaagcacgagagaa
gatgttatctctggaattgacaattttataagtccacaaagcaatttacaggtgctcatt
gtttcatatgagacatttcgaatgcattcgtcaaagtttagctctagtggctcatgtgat
cttctcatatgtgacgaggctcacagactgaaaaatgatcagaccataacaaaccgggca
ttggcagctctcccctgcaaacgtagaattttgttgtcaggaactcctttgcaaaatgac
ttagaagaattctttgcaatggttaactttactaatcctggaatattgggtgatattgcg
cattttcgacgttactatgaggcaccgattatttgtggaagagaacctgctgccccccca
gaagagaagaagctaggtgctgaacgctctgctgaattaagtgttaatgttaatcggttc
atattaagaaggactaatgcattgttatcaaatcacttgccacctaagatagttgaagtt
gtttgctgcaagttgactccactacagtcagacctatataaacattttatacaatccaaa
aatgttaagcgggcaattagcgaagaacggaagcaatcaaagattttggcttacattaca
gctctcaaaaagttgtgcaatcatccaaagcttatctatgataccatacgaaatgggagt
ccaggaacttcaggttttgaggactgtatccgattcttccctcctgaaatgttatctgga
aggtctggctcatggacgggagggcatggagcgtgggttgagctatccggtaaaatgcat
gtcttagcaagattactagctcatttacgccagagaacaaatgaccgcattgtccttgtc
tcaaactacactcagaccctcgatcttttttctcaattgtgtcgggaacgaaggtaccct
cacttgaggcttgatggcactacatcaatcagtaaaaggcagaaaatggtcaactgcttt
aatgatccatccaaggacgaatttgtttttctcttgagcagcaaggctggtggttgtgga
ctcaatttgattggtggaaatcgacttgtcttatttgatcctgattggaatcccgcaaat
gataaacaagctgctgcaagagtatggagggatggacagaagaaaagagtttacatttat
agatttttgagtgccggaacaatagaagaaaaggtctaccagcgtcagatgtcaaaagaa
gggctgcaaaaggtcattcagcaggggcaaactgatagccttgtggcacaggctaacttt
ctttctacagaggatcttcgtgatttgtttacttttcatgcgaacatcaagtcagagatt
catgaaaagatgcaatgcagtcggtgtcaaacattcgacggccttcaaagcactgagggt
caatcaacaacaacagatagtgaatctgatggagaaacctctgatataggtggatttgca
gaaactgctggctgcttacagaatttaaaaagatcagaaaagcaggtagggagccctttg
gaggaggatttaggaagctggggccatcattttttcccaacttctgtaccagatgctatc
ctacaggcttcagccggtgatgaggtgacttttgtcttctcaaaccaagttaacggacga
ctggtacccattgagtccaacatcagtcccaaggtacagcaaaaggaattactcaagtca
aagcagaacggtaaacaaaaacctatgcctttttctttacataacagactaccaccgcag
tctgcttctggtattgctagtaatagtatgtcatcatccactcccaatgcttggacgaag
gaaacactaaattctatcgggattaccaaaaacatttccatgaatgtagcatttgagacc
aactattctcttgcaggtaacatattacctctgaaaagatcatgccctgctaatatcaat
gatgataattttgaataa
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