Cajanus cajan (pigeon pea): 109816751
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Entry
109816751 CDS
T04868
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109816751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaj03021
]
109816751
Transcription machinery [BR:
ccaj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
109816751
Prokaryotic type
Archaeal type
TFB
109816751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
WHD_GDS1
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
109816751
NCBI-ProteinID:
XP_020237437
LinkDB
All DBs
Position
2:complement(17212971..17217653)
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AA seq
312 aa
AA seq
DB search
MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPTNPLLTDGGLSTVIAKPNGGSGEFLSSSLGRWQNRGSNPDRALILAFKTIATMSDRLG
LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLGLENGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF
DIRRSPISIAAAVIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPNWY
AKEEDLKNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgcgttctgcagcgactgcaagaggcacacggaggttgtgttcgaccactcc
gcgggcgacacggtgtgctcggagtgcggcctcgtcctggagtctcactccattgacgag
acctccgagtggcgtaccttcgccaacgagtccggcgacaacgatcctgtccgtgtcggc
ggccccaccaatcccctcctcaccgacggcggcctttccactgtcatcgccaagcccaac
ggcggctccggcgagttcctctcctcctccctcggccgctggcagaaccgcggctccaac
cccgatcgcgccctcatcctcgcattcaagaccatcgccaccatgtccgacaggttggga
ctcgtcgcgaccatcaaggatcgagcaaatgagatatataagagggttgaagatcaaaag
tctagtagaggaagaaatcaagatgctttattggctgcttgtctctacattgcttgccga
caagaagacaaacctcgtactgtaaaggaaatttgctctgttgccaatggggccacaaag
aaggaaattggccgagcaaaagaatacattgtaaaacaactgggtttggagaatgggcag
tctgtggagatgggtaccatacatgcaggggactttatgaggcgattctgttctaatctt
ggtatgaataatcaagctgttaaagctgctcaggaagctgtgcagaaatcagaagaattt
gatataaggaggagtcccatatcaattgctgcagcagttatatatatcataactcaactt
tctgatgataagaaacctctcaaagatatatcgattgctacaggtgttgctgaaggaacg
attaggaactcctacaaggatctctatccccatgtttcaaaaataataccaaattggtat
gccaaggaggaggatttaaagaacctttgcagcccttga
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