Cajanus cajan (pigeon pea): 109816923
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Entry
109816923 CDS
T04868
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 16
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccaj03009
]
109816923
Enzymes [BR:
ccaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109816923
Ribosome biogenesis [BR:
ccaj03009
]
Eukaryotic type
Pre-60S particles
Helicases
109816923
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
109816923
NCBI-ProteinID:
XP_020237673
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All DBs
Position
2:24925974..24932129
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AA seq
600 aa
AA seq
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MAETRESASKETVRKEEEEEAEDQSFEELGLDARLLRALLKKGIEKPTPIQRVAIPLILE
GKDVVARAKTGSGKTFAYLLPLLQKLFTANADRKKLAPNAFVLVPSRELCQQVYKEVLSL
IELCRVQLKVVQLNGNMLVNDLRAALAGPPDVLISTPACIAKCLSSDVLKAASINQSLET
LVLDEADLLLSYGYESDIKAFTPHVPRSCQCLLMSATSSADVDKLKKLILHNPFILTLPE
VGNHKDEVIPKNVQQFWISCPASDKLLYTLALLKLELVQKKVLIFTNTIDMSFRLKLFLE
KFGIRSAVLNPELPQNSRLHILEEFNAGLFDYLIATDLSQSKEKDEETKESNVGSRKSRK
HAKIKLDSEFGVVRGIDFKNVYTVINLEMPQSLAGYVHRIGRTGRAYSSGASVSLVSPDE
MDTLEEIRSFIGDDESKGTNSIVEFPLTKNAVESLRYRAEDVGKSVTKVAVRESRAQDLR
NEILNSEKLKAHFETNPRDLDLLKHDKVLSKNAPPPHLRNVPDYLLDKTTKEAREMVKLA
RDAMGNNNRRRGSKRKLRKDGDPLKAIAAVGSRRRHKDRKTGASNSNNSGAKHKRKKNDI
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaacgcgcgaatccgcgtcgaaagaaaccgttcgcaaagaagaagaagaagaa
gctgaggaccaaagcttcgaagagctcggtctggacgctcgtctccttcgcgccttactc
aagaaagggatcgagaaacccactccaattcagcgcgtcgcgattccactcattttggaa
ggcaaggacgtggttgctcgagcgaaaacaggttcgggaaagaccttcgcgtaccttctc
ccgttgctccagaaactcttcactgccaatgctgatcggaagaagctcgcgccaaatgct
ttcgttcttgttccttctcgtgaactgtgtcaacaggtatataaggaagtgctgtcgctc
attgagttatgcagagttcagctgaaagttgtgcagttgaatggcaacatgcttgttaat
gacttgcgggcagcattggctggaccccctgatgttttgatctccactcctgcttgcatt
gcgaagtgtttgtccagtgacgtactgaaggcggcatccattaaccaatcgcttgaaact
ctagttctagatgaggcagatcttctattatcatacggctatgaaagtgatataaaagct
tttacaccacacgttcccagaagttgccagtgtcttcttatgtctgcaacatcaagcgcg
gatgttgacaaattaaagaagttgattctacacaacccctttattttgactttgcctgaa
gttggaaatcataaggatgaagtcattcctaaaaatgttcagcaattttggatctcatgc
cctgccagtgataagttgctttacacccttgctctgctgaagttggagttggtccaaaag
aaagttctgatattcactaataccattgacatgagtttcagactgaaactattcttggaa
aagtttgggatcagatctgctgttttaaatcctgagttgcctcagaattctcgtctccat
attcttgaggaattcaatgctggcctatttgattatctaattgcaacagatcttagccag
tcaaaggaaaaggatgaagagaccaaagaaagtaatgttggatcacggaagtctagaaaa
catgctaaaataaaattagattctgaatttggagttgtaagggggattgactttaaaaat
gtatacacggttataaaccttgaaatgcctcagagtcttgcgggatatgtacatcgaatt
ggccgtacaggaagagcatacagttctggtgcttctgtctctctggtttctccggatgag
atggatactttagaagaaataagatcttttattggagatgatgaaagcaaaggaacaaat
tctatcgtggagtttcccctcaccaagaatgcagttgaatctttacggtacagggctgag
gatgtcgggaagagtgtaactaaagttgctgtccgagagtcacgagcgcaggatttgagg
aatgaaattttgaactctgaaaagttgaaagcccactttgaaactaatccaagagaccta
gatctactgaagcatgacaaagtattgagcaagaatgctcctccaccgcacctacgtaat
gtgcctgactacctattagacaaaacaacgaaagaggcaagggaaatggtcaagcttgca
agggatgcaatgggaaataataatcgccgcagaggatccaagagaaaattaagaaaagat
ggagatcctctaaaggctatcgctgctgtgggatcaagaagacggcacaaagataggaag
actggtgcaagcaatagcaacaatagcggtgctaaacataaacgcaaaaaaaatgatatt
tga
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