KEGG   Cajanus cajan (pigeon pea): 109816932
Entry
109816932         CDS       T04868                                 
Name
(RefSeq) histone deacetylase 19 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03082  ATP-dependent chromatin remodeling
ccaj03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    109816932
   03083 Polycomb repressive complex
    109816932
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccaj03036]
    109816932
Enzymes [BR:ccaj01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     109816932
Chromosome and associated proteins [BR:ccaj03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     109816932
   HDAC complexes
    Sin3A-HDAC complex
     109816932
    BRAF-HDAC complex
     109816932
    REST complex
     109816932
    SHIP complex
     109816932
    MiDAC complex
     109816932
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     109816932
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    109816932
  Chromatin remodeling factors
   NuRD complex
    109816932
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 109816932
NCBI-ProteinID: XP_020237696
LinkDB
Position
Unknown
AA seq 496 aa
MDTGGNSLPSAPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
VHKPFPARDRDLCRFHADDYVAFLRSITPETQQDHLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHDQCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGYGKGKYYSLNVPLDDGI
DDESYHFLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSHHLLEEIRSKLLENLSKLQHAPSVQFQERPPDSDLGEADEDHDDGDEAWDPDSDMDI
DAERELVSSKVKKEIAEPQLNDLEDQRSGEHLRGSDTAIAETCMKALDISSQQADEDNVK
IEHTVNDLAREKDLKC
NT seq 1491 nt   +upstreamnt  +downstreamnt
atggataccggcggcaattctttaccatctgcacctgacggggtgaagagaaaggtgtgc
tatttctatgatccagaggttgggaattactattatgggcaaggtcacccaatgaagcca
catcgtatacggatgacacatgctcttctagcccattatggactgcttcagcacatgcaa
gtccataagccatttcctgctagagacagggacctttgtcgttttcacgctgatgattat
gttgcattccttcggagcataactcctgaaacacagcaggatcatctgaggcaactcaaa
cgctttaatgttggtgaagattgtcctgtttttgatggcctctactctttctgccaaact
tatgctgggggttcagttgggggtgctgtcaagttaaatcatgaccaatgtgatattgct
gtcaactgggctggtgggttgcatcatgccaagaagtgtgaggcttctggattttgctat
gttaatgatatagtcctcgcaatcttagaacttcttaaacagcatgagcgtgttctatat
gtggacattgatattcaccatggagacggtgtggaggaagctttctacactactgaccga
gtcatgactgtttctttccataaatttggggactattttcctggtacgggggacgtacgt
gatattggatatggaaaaggaaaatactactctcttaatgttccacttgatgatggcatt
gatgatgagagttatcatttcttgttcaaaccaataattggcaaagtaatggaagtgttc
aggcctggtgcagtggttctccagtgtggtgctgattctttatctggagaccgattggga
tgctttaatctttcaatcaggggtcatgcagagtgtgtcagatacatgagatcattcaat
gtgcctctcttgctactaggtggtggtggctacaccattcggaatgttgctcgatgttgg
tgctatgagacaggagttgctcttggaatagaagttgatgacaaaatgccacagcacgag
tattatgaatattttggtccggattatacccttcatgttgccccaagtaacatggaaaac
aagaattcccatcatttacttgaagaaattcgatctaagctacttgagaatctttccaag
ctgcagcatgctccaagtgtccaatttcaggaaaggcctcctgattctgatcttggagag
gcagatgaagatcatgatgatggagatgaggcatgggatccagattcggacatggacatt
gatgctgaacgtgagcttgtctctagcaaagtaaagaaagaaattgctgaacctcagctg
aatgatctggaggaccagagaagtggagagcatttgagaggctctgatactgcaattgct
gaaacttgcatgaaggctctagatatttcctctcaacaagctgatgaagataatgtgaaa
attgaacatactgtgaatgatttggccagagagaaggacctgaagtgttaa

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