KEGG   Cajanus cajan (pigeon pea): 109817088
Entry
109817088         CDS       T04868                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109817088
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccaj03021]
    109817088
Enzymes [BR:ccaj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     109817088
Transcription machinery [BR:ccaj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     109817088
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 CFAP77
Other DBs
NCBI-GeneID: 109817088
NCBI-ProteinID: XP_020237870
LinkDB
Position
Unknown
AA seq 1196 aa
MGHVGSSKDGTKAGASMDIFGGDDDDLGDLGPSNAEILEEIGEWKVRELCKKASMLFFNE
YGLISHQINSYNHFVAIGLQQTFDSFGDLVITPGFDPSKKGDNEHYRYASVKFGKVKLEK
PMFWGGEGNAQEFKMLPRHARLQRMTYASKIKIEVNVQVYVPKKVRSDKFKTGKEEFLDR
EILKEDDREIIIGRLPVMVKSDLCWMNGAEKYDCEFDHGGYFLIKGAEKTFIAQEQLYLK
RLWVLNSPGWVIAYKSQMKRNRMVVKLVGNSGGSEETDNGDMSLTVYFLSVEIPVWILFF
ALGVSSDREVVDLIGCGSDDARIQNILFASVRDADEKCGSYRRGKFAVQYLESKVKGVQF
PPSESIQECLEMYVFPGIKGLNRKARFLAYMVKGLLLAYTGRRKCDNRDDFRNKRLELAN
ELLDRELKVHIAHARKRMAKALQRDLYGDREVRPIEHYLDASIITNGLQRAFSTGAWSHP
YKRMERISGVVANVGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPD
GENCGLVKNLAVTGLVSTNVLDTSESILPKLLECGMEELVDDTSTRLGNKDKIFLNGDWV
GVCADSSSFVAELRSRRRRNEMPHQVEIKRDQSQHEVRIYSDAGRILRPLLVVGNLLKIK
DFKSERYSFQSLLDRGVIELIGPEEEEDCTTAWGVQYLFGKEGKRTAEYTHCELDMSFLL
GLSCSLVPFANHDHARRVLYQSQKHSSQAIGFSTVNPLIRVDTLSHQLHYPQRPLFRTMT
SDSLGKAELCQKELLPKAEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLQRGMFRSEHVR
SYKSEIENKDSSEKKRKPEDIVNFGKLQSKIGRVDSLDDDGFPYVGANLQSGDIIIGRCA
ESGADNSVKLKHTERGYVQKVVLSSNDEGKNFAVVSLRQVRSPVLGDKFSSMHGQKGVLG
FLECQENFPFTRQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGKLRYATPFSTPS
VDAITDQLHSAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLHHMSEDKVKFRNTGPV
HPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLYERLFTLSDSSQIHICSKCKNVAN
VILRPVSGGRKIRGPHCRHCDSADEIVVANVPYGAKLLCQELFSMGINLKFETQLC
NT seq 3591 nt   +upstreamnt  +downstreamnt
atgggccacgtaggttccagcaaggacggcaccaaggccggcgcgtcgatggacatcttc
ggcggcgacgacgacgacctcggcgacctcggtccgagcaacgccgaaatcctcgaagaa
atcggcgaatggaaggtccgcgagctctgcaagaaggcctcgatgctgttcttcaacgag
tacggtctgatcagccaccagatcaactcctacaaccacttcgtcgccattggccttcag
caaaccttcgattccttcggcgaccttgtcatcacgcccggcttcgatccttccaagaag
ggcgacaacgagcactaccgttacgcctccgtcaagttcggcaaggtcaagctcgaaaag
cccatgttctggggcggcgaagggaacgcgcaggagtttaagatgcttccccgccacgcc
aggcttcagaggatgacctacgcttccaaaatcaaaatcgaagttaacgttcaggtctat
gttccgaagaaggttcgaagtgataagtttaagactgggaaggaggagttcctggataga
gagattctgaaggaagatgacagggagattatcattgggagattgcctgtcatggtcaag
tctgatttatgctggatgaatggggcggaaaagtatgactgtgaatttgaccatggcggg
tattttctcattaagggtgcagagaagacttttattgcacaggagcaactgtatttgaag
aggctatgggttttaaatagtccaggctgggttattgcctacaagtcacagatgaagaga
aataggatggttgttaaactggtagggaattctggtggcagtgaagaaacggacaatggg
gacatgtctctgactgtgtattttttgtctgttgagattcctgtgtggatactatttttt
gctcttggtgtctcttctgacagagaggttgtagatctcattggatgtggaagtgatgat
gctagaattcagaatattctctttgcatctgttcgtgatgctgatgaaaaatgtggatca
tatcggagaggtaagtttgcagttcaatatttagaaagtaaagtaaaaggtgtccaattt
ccaccttctgaatctattcaggagtgccttgaaatgtatgtctttccgggaattaaagga
ttaaatagaaaggcgcgcttccttgcatatatggttaagggtctcttgctggcttatact
ggccgcagaaaatgtgataatagggatgacttccgaaataagaggcttgaattggccaat
gagctgcttgaccgtgagttgaaggtgcacattgcacatgcaaggaagcgaatggcaaag
gctttgcagagagacctttacggagatagggaagtacgcccaattgagcattatctcgac
gcatcaataattacaaatggtttgcaaagggcattttcgactggagcatggtcacatcca
tacaagaggatggaaaggatctcaggtgtggttgcaaatgttgggcgtactaatccctta
caaaccatggccgagttgagaagaacacggcagcaagtccagtacacgggaaaagtaggg
gatgctagatacccgcacccgtctcactggggaaaggtatgtttcctctctaccccagat
ggtgaaaattgcggactagtaaaaaatttggctgtcacagggctagtaagtactaatgta
ttggacacatctgaatctatactgcctaaattgttggaatgtggaatggaagaacttgta
gatgatacttccactcgtctgggtaacaaggacaaaatcttcctaaatggtgattgggtt
ggagtgtgtgctgattccagttcgtttgtggcagagctacgaagtagaagacggagaaat
gaaatgcctcatcaggtggagatcaagagagatcaatctcaacatgaagtgcgcatatac
tctgatgcaggaaggattctacgtcctcttttggtagttggtaatctactcaagattaaa
gattttaaatcagaacgttattcttttcaatctctattggataggggtgtgattgagctg
attggacccgaagaagaggaagactgcactactgcctggggtgttcagtatttatttgga
aaagagggaaaacgtactgctgagtacacacactgtgaacttgatatgtcattcttattg
ggtttaagctgttcacttgtaccgtttgctaatcatgaccatgcaaggagggtactctac
cagtctcagaagcactcctcacaggctattggcttttctacagtaaacccgctaattaga
gttgatactttgtctcaccagttacactacccccaaaggccactttttcgaacaatgaca
tcagattctcttggaaaagcagaactgtgtcaaaaggaactacttccaaaggcagaattc
tataatgggcagaatgcaatagtggctgtcaatgtacatctgggatacaatcaagaggat
tccctggtgatgaaccgtgcttcgttgcagcgtggtatgttcagatctgagcatgtaagg
agttacaaatctgaaattgaaaataaggactcttcggagaaaaagcgaaaacctgaagac
attgtaaattttggaaaattacaaagtaagattggtcgagttgacagccttgatgatgat
ggctttccatatgttggagcaaacttacaaagtggtgatattattattgggcggtgtgct
gagtctggtgccgacaatagtgtgaagttaaaacacactgagaggggttatgtgcaaaag
gttgtgctgtcttcaaatgatgaagggaaaaattttgctgtggtttcgttaagacaggtt
cgaagtccagttcttggagacaagttctccagtatgcatggacaaaagggagttttggga
tttctggagtgtcaggaaaattttcctttcacaagacaaggcattgttcctgatattgtc
ataaatccgcatgcatttccttcacgacaaactcctgggcaactcctagaggctgcttta
ggaaaggggattgcttgtggtggtaaactgagatatgctacgcctttctccactccttct
gttgatgccattaccgaccaacttcacagtgctggattttcaagatggggaaatgagagg
gtatacaatgggaggactggtgagatggtccgatcactcatttttatgggaccgacgttt
taccaacgtctacaccacatgtctgaagacaaagtgaaattccgcaacactggaccggtt
cacccgctgacccgacagcctgtagctgacagaaaacgatttggaggtatcaagttcggt
gaaatggagcgtgattgccttattgctcatggtgcatcagccaacctgtatgaacgcctc
ttcacactcagtgactcctctcagattcacatatgcagcaaatgcaaaaatgttgcaaat
gtgatcttgcggccagtctccggtggccggaaaatacgaggacctcattgccgccactgt
gattctgcggacgaaattgtggtggccaatgtcccgtatggagcaaaattattatgccag
gagctctttagcatgggcataaatcttaaatttgaaactcaactttgttag

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