Cajanus cajan (pigeon pea): 109817104
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Entry
109817104 CDS
T04868
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109817104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaj03021
]
109817104
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109817104
Transcription machinery [BR:
ccaj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109817104
Coactivators
SAGA/TFTC/STAGA complex
109817104
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
109817104
STAGA complex
109817104
TFTC complex
109817104
SAGA complex
109817104
SLIK complex
109817104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF4
Ge1_WD40
Beta-prop_Vps41
Beta-prop_Nup120_160
WD40_like
PROPPIN
Beta-prop_WDR35_TULP_N
WD_LRWD1
LisH
Beta-prop_DCAF12
Beta-prop_VPS8
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
109817104
NCBI-ProteinID:
XP_020237888
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MDDDKIIGYVTAYLKKKGFTQTEKVFQEEFQHNKSNSLLEPDIANHLLAFSHLESGPARF
HDGYSKLRTWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHVQEARNFFNTFREDHEMM
HLRDLQKLEGVLSPTHLEEMEFAHSLRQSKFNIKICEYSNELLLQHLHSTQSTTILGIIN
EHINFQVTPGQPSLISDDPEAVTLTGSSQEAANRINQKEIHWGLLEDSLEERLEKAGALL
SDSEKGEGDAKEGENEETKKRSIEGGKQGASVKKVKKDKGGSATGKNAKPESNTAPAAPR
VKPELPLPVIPTEVEQSILEDLRNRVQLSSVALPSVSFYTFINTHNGLSCSSISHDGSLV
AGGFSDSSLKVWDMAKLGQQPTNSLLQGENDTSQNEHMLGQGGGKRQYTLFQGHSGPVYA
ASFSPVGDFILSSSADSTIRLWSTNLNANLVCYKGHNYPVWDVQFSPVGHYFASSSHDRT
ARIWSMDRIQPLRIMAGHLSDVDCVQWHVNCNYIATGSSDKTVRLWDVQSGECVRVFVGH
RGMILSLAMSPDGRYMASGDEDGTIMMWDLSSGRSLTPLIGHTSCVWSLAFSSEGSILAS
GSADCTVKLWDVNTSTKVSRAEEKSGNANRLRSLKTLPTKSTPVYSLRFSRRNLLFAAGA
LAKSG
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgataaaataatcggatacgtgactgcgtacctgaagaagaaagggttcacg
caaaccgagaaggtttttcaggaagaattccaacacaacaagtccaattcccttctcgaa
cccgacatcgccaatcaccttctcgcattctctcacttggagagtggtcccgccaggttc
cacgacggctacagcaaactaagaacatggacttattcttccctcgacttgtacaagcac
gagttgcttcgcgtgctttatcccgtgtttatacactgctttatggatcttgtcgccaaa
ggacacgttcaggaagctcggaactttttcaatactttccgtgaagaccatgaaatgatg
cacttacgggaccttcagaagttggaaggagtactttctcctacccatctcgaggagatg
gaattcgctcattcacttagacagagcaaattcaacataaagatatgtgagtattccaat
gagcttctgttgcaacatctacacagtacacaatccaccactatacttggcattatcaat
gagcatattaactttcaagttacccctggacaacctagcttaatttctgacgatccagaa
gctgttacccttactggaagcagccaggaagcagcaaaccggataaatcaaaaagaaata
cattgggggttgcttgaagactctcttgaagaacggctggagaaggctggggccttgctt
tcagactctgaaaagggtgaaggggatgcaaaagagggggagaatgaggagactaagaaa
agatccattgaaggaggaaagcaaggtgcttcagtcaaaaaagtaaaaaaggacaagggt
ggaagtgccaccggaaaaaatgcaaaacctgagtctaacactgcacctgcagctcctcga
gttaagccagaactccccttgcccgtaattccaactgaggtggagcagtccatccttgag
gatttaaggaaccgtgtacagcttagcagtgttgcattgccatcagttagcttttacaca
tttatcaatacacataatggtttaagctgttcatcaatatcccatgatggatcattggtt
gctgggggattttctgactcatctctgaaggtttgggatatggcaaagcttggacaacag
cctaccaattctcttttgcagggtgagaatgacacatcacaaaatgaacatatgttaggg
caaggtggtgggaaaagacagtatacattgtttcaaggtcattcagggcctgtttatgca
gcctcttttagtcctgtcggggattttatcctttcttcctctgcagactcaacaattcgt
ttatggagcacaaatcttaatgcaaatcttgtttgttataagggtcacaattacccggtc
tgggatgttcagtttagtcctgtagggcattattttgccagctcttcacatgacagaact
gctaggatttggtccatggacaggatacagcccttaagaataatggctgggcacttgtct
gatgttgattgtgtgcaatggcatgtcaactgcaactacattgcaactggttccagtgac
aaaacagttcgactatgggatgtgcagagtggcgagtgtgtccgagtttttgttggtcac
aggggtatgattttgtctctggcaatgtctcctgatggtcgctatatggcatctggcgat
gaagatggtacgatcatgatgtgggacctttctagtggccgtagtcttacacctttaatt
gggcacacatcatgtgtctggtcgctcgctttcagttctgaaggttctattctagcatct
ggatctgctgattgcactgtaaaattatgggatgtaaatacgagcaccaaggtttcaagg
gctgaagaaaaaagcgggaatgctaacagacttagatcattgaaaactctgccaaccaaa
tcgactccagtttactctttgcggttttctcgaaggaatcttctttttgcggctggagca
ctagcaaaaagtggctaa
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integrated database retrieval system
