Cajanus cajan (pigeon pea): 109817104
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Entry
109817104 CDS
T04868
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109817104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaj03021
]
109817104
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109817104
Transcription machinery [BR:
ccaj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109817104
Coactivators
SAGA/TFTC/STAGA complex
109817104
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
109817104
STAGA complex
109817104
TFTC complex
109817104
SAGA complex
109817104
SLIK complex
109817104
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_IFT122_1st
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
DSE1_N
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_VPS8
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_WDR75_1st
ASA1
CFAP251_N
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
PAC11
Beta-prop_EIPR1
Beta-prop_SPT8
Tricorn_2nd
Beta-prop_HPS5
Beta-prop_DCAF4
Ge1_WD40
Beta-prop_Vps41
LisH_SSDP
PROPPIN
Beta-prop_WDR35_TULP_N
WD_LRWD1
LisH
Beta-prop_DCAF12
Cytochrom_D1
Dimer_MINDY4_N
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
109817104
NCBI-ProteinID:
XP_020237888
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MDDDKIIGYVTAYLKKKGFTQTEKVFQEEFQHNKSNSLLEPDIANHLLAFSHLESGPARF
HDGYSKLRTWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHVQEARNFFNTFREDHEMM
HLRDLQKLEGVLSPTHLEEMEFAHSLRQSKFNIKICEYSNELLLQHLHSTQSTTILGIIN
EHINFQVTPGQPSLISDDPEAVTLTGSSQEAANRINQKEIHWGLLEDSLEERLEKAGALL
SDSEKGEGDAKEGENEETKKRSIEGGKQGASVKKVKKDKGGSATGKNAKPESNTAPAAPR
VKPELPLPVIPTEVEQSILEDLRNRVQLSSVALPSVSFYTFINTHNGLSCSSISHDGSLV
AGGFSDSSLKVWDMAKLGQQPTNSLLQGENDTSQNEHMLGQGGGKRQYTLFQGHSGPVYA
ASFSPVGDFILSSSADSTIRLWSTNLNANLVCYKGHNYPVWDVQFSPVGHYFASSSHDRT
ARIWSMDRIQPLRIMAGHLSDVDCVQWHVNCNYIATGSSDKTVRLWDVQSGECVRVFVGH
RGMILSLAMSPDGRYMASGDEDGTIMMWDLSSGRSLTPLIGHTSCVWSLAFSSEGSILAS
GSADCTVKLWDVNTSTKVSRAEEKSGNANRLRSLKTLPTKSTPVYSLRFSRRNLLFAAGA
LAKSG
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgataaaataatcggatacgtgactgcgtacctgaagaagaaagggttcacg
caaaccgagaaggtttttcaggaagaattccaacacaacaagtccaattcccttctcgaa
cccgacatcgccaatcaccttctcgcattctctcacttggagagtggtcccgccaggttc
cacgacggctacagcaaactaagaacatggacttattcttccctcgacttgtacaagcac
gagttgcttcgcgtgctttatcccgtgtttatacactgctttatggatcttgtcgccaaa
ggacacgttcaggaagctcggaactttttcaatactttccgtgaagaccatgaaatgatg
cacttacgggaccttcagaagttggaaggagtactttctcctacccatctcgaggagatg
gaattcgctcattcacttagacagagcaaattcaacataaagatatgtgagtattccaat
gagcttctgttgcaacatctacacagtacacaatccaccactatacttggcattatcaat
gagcatattaactttcaagttacccctggacaacctagcttaatttctgacgatccagaa
gctgttacccttactggaagcagccaggaagcagcaaaccggataaatcaaaaagaaata
cattgggggttgcttgaagactctcttgaagaacggctggagaaggctggggccttgctt
tcagactctgaaaagggtgaaggggatgcaaaagagggggagaatgaggagactaagaaa
agatccattgaaggaggaaagcaaggtgcttcagtcaaaaaagtaaaaaaggacaagggt
ggaagtgccaccggaaaaaatgcaaaacctgagtctaacactgcacctgcagctcctcga
gttaagccagaactccccttgcccgtaattccaactgaggtggagcagtccatccttgag
gatttaaggaaccgtgtacagcttagcagtgttgcattgccatcagttagcttttacaca
tttatcaatacacataatggtttaagctgttcatcaatatcccatgatggatcattggtt
gctgggggattttctgactcatctctgaaggtttgggatatggcaaagcttggacaacag
cctaccaattctcttttgcagggtgagaatgacacatcacaaaatgaacatatgttaggg
caaggtggtgggaaaagacagtatacattgtttcaaggtcattcagggcctgtttatgca
gcctcttttagtcctgtcggggattttatcctttcttcctctgcagactcaacaattcgt
ttatggagcacaaatcttaatgcaaatcttgtttgttataagggtcacaattacccggtc
tgggatgttcagtttagtcctgtagggcattattttgccagctcttcacatgacagaact
gctaggatttggtccatggacaggatacagcccttaagaataatggctgggcacttgtct
gatgttgattgtgtgcaatggcatgtcaactgcaactacattgcaactggttccagtgac
aaaacagttcgactatgggatgtgcagagtggcgagtgtgtccgagtttttgttggtcac
aggggtatgattttgtctctggcaatgtctcctgatggtcgctatatggcatctggcgat
gaagatggtacgatcatgatgtgggacctttctagtggccgtagtcttacacctttaatt
gggcacacatcatgtgtctggtcgctcgctttcagttctgaaggttctattctagcatct
ggatctgctgattgcactgtaaaattatgggatgtaaatacgagcaccaaggtttcaagg
gctgaagaaaaaagcgggaatgctaacagacttagatcattgaaaactctgccaaccaaa
tcgactccagtttactctttgcggttttctcgaaggaatcttctttttgcggctggagca
ctagcaaaaagtggctaa
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