Cajanus cajan (pigeon pea): 109817245
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Entry
109817245 CDS
T04868
Name
(RefSeq) autophagy-related protein 13a isoform X2
KO
K08331
autophagy-related protein 13
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
109817245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccaj04131
]
109817245
03029 Mitochondrial biogenesis [BR:
ccaj03029
]
109817245
Membrane trafficking [BR:
ccaj04131
]
Autophagy
Autophagosome formation proteins
ULK complex
109817245
Atg1 complex
109817245
Mitochondrial biogenesis [BR:
ccaj03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
109817245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
109817245
NCBI-ProteinID:
XP_020238051
LinkDB
All DBs
Position
2:complement(7972217..7977385)
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AA seq
595 aa
AA seq
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MDLHNNVQPELGKLEQIIYQFLLKCLHIILDSRVPFLRPHDRSGDMSIGPRVKRSDKWFN
LALGDRPSALDNLHFWHRNLMDPMIIDIILVHEVDGSSVETVIERWIVQYDCPRVVAPQT
GDITSSYKKTYQKSIVLFRALYSQMRLLPAYKIFRQLSTASHTCNFDIIYKVSSFSDPFS
RAEGGMMEEYSFTPVEALPGRLCISVTYRSTLSDFNLECSASLPTKIITDYVGSPNTDPL
RSFPASDKGVRATSFPLRGIAPPTSVPLERPHSWTYGFHKAAPFVQNHPSVGSSPVYRGS
PKPYDFPSPPTDGYGVRLHNYRMHNRQWSTSYDEYQLSPPFSPSPSPSPPTYFCGGNPMQ
TRLRSETAPVTIPHPVMSKSSRNLSPNFSDPSRNSLPPLSPRRNDGSSHESPSGIRSFRK
LEASRTGQKFVRDSKDDSGRFSGLLSSSGSPRIGFSRTSSRLSFQDELDDGDFSCPFDVD
DVDPPDVQSSHNVVGKSAAEITSTSLPMGKKSQDAAVGVLVHMLRTAPPLRQDPSCYSSH
SPKADAEPVGGIATASGFFMPRKTADALEELRGYREMRDLLLSKSGTRILNRHEA
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcacaataatgtgcagcctgaattgggcaaattggaacaaattatttatcaa
tttcttttgaagtgcttgcacatcattttggactctagggtaccttttttacggccacat
gatcgaagtggtgacatgtcaatcggtcctagggtgaagaggagtgacaagtggtttaac
ttggcactaggtgacaggccttctgccctagataacttgcacttctggcacaggaatttg
atggatccaatgataattgacattatactagttcatgaagtggatggttcttctgttgag
actgttatagagaggtggatcgttcagtatgattgtccccgtgttgtggctccccaaact
ggtgacattactagctcttacaagaagacataccagaagtcgatagtactctttcgcgct
ctttattctcaaatgaggcttctcccagcttataagatatttaggcagctaagcactgcc
agccatacttgtaattttgatattatttacaaggtttcttcctttagcgatcccttctct
cgagcagaagggggaatgatggaagagtatagtttcactcctgttgaggctcttcctggc
cgcctttgtatatctgtgacctaccgctctacgctgtctgatttcaaccttgagtgttca
gcttcattgccaacaaaaataattactgattatgttggaagccccaacactgatcctttg
aggtctttccctgcctcggataagggtgttcgtgctacttcctttccactgagagggata
gcacctccaacttctgtgccacttgaacgtcctcatagctggacttatggtttccataag
gcagcaccttttgtacagaaccatccttctgttggctcctcaccggtttatcgaggttct
cccaagccatatgattttccatccccacctactgatggttatggtgtcagattgcataac
tatcgaatgcacaatcggcaatggtctacaagttatgatgaatatcaactttctcctccg
ttctcaccctcaccatctccatcgccacctacatacttctgtggtggcaatccaatgcaa
actcgactacgttctgaaacagcccctgtaactatacctcatccagtaatgagcaaaagc
tccagaaatctttctcccaatttttcagatcctagtcggaattctctgcctcccttgtct
cccagaaggaatgatggttcatcacacgagtctccatctggaatcaggtcattcaggaaa
ttagaagcttcaaggactggtcaaaagtttgtcagagatagcaaggatgattcagggagg
ttctctgggttgttatcttcaagtggctcaccacgcattggattttctagaacttcaagt
agattatcatttcaggatgagttggatgatggtgacttttcatgtccttttgatgttgat
gatgttgatccaccggatgttcaatccagtcacaacgtggttgggaagagtgctgcagag
attacttcaacttcactgccaatggggaaaaaatcacaagatgctgctgttggtgttctt
gtgcacatgctcaggactgcgccgccgttgcgccaagatccaagctgctattcatcccat
tccccaaaggctgatgctgaacctgtgggaggaattgccactgcttctggattcttcatg
cctcgaaagacggcggatgcacttgaagagctcaggggttacagagaaatgagagacctt
cttctttccaagagtggcactcggatcctgaacagacatgaagcttaa
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