Cajanus cajan (pigeon pea): 109818285
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Entry
109818285 CDS
T04868
Name
(RefSeq) uncharacterized protein LOC109818285
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109818285
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109818285
Surveillance factors
Other surveillance factors
109818285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Tis11B_N
Motif
Other DBs
NCBI-GeneID:
109818285
NCBI-ProteinID:
XP_020239315
LinkDB
All DBs
Position
Unknown
AA seq
1610 aa
AA seq
DB search
MGDGKVNLPDDLFSSKLSDSLRDEASGGHGGEKGIAALLDDSKDQVSSDNSIPLSPQWLY
SKPVDARATANPAGVNSTDPILKDSWRLEGSQDKKDWRRTAPDVDISRRWREEERETSLL
GRRDRRKEDRRLENTSTSENRSLPSDRWHESRGSGHDSRRENKWSSRWGPEDKEKDSRSE
KRNDVEKEDVHSEKQSSGVGNRMGSDRDNDSRDKWRPRHRLEAQAAGVATYRAAPGFGLE
KGRTEGSSVRFSPGRGRANINGNLQIVRPPIGSSGGPALVDKNKIILGKSSLGAGSYFYP
RGKLLDIYRKQKVDPNFDSLPAEMEHTSPLTQLGSVEPLAFVAPAAEEETVLKEIWKGKI
TSSEVSGYSLRGKDGGSNDDISGPGITSEGKKPLIGSGAKVISGSDVLDDSDQILIGSSS
TAGSLLRNITEEVATFQEGKLKHMPTIGVHGRDESYVNSIAEGSILGNKVAESTTFDLHQ
GQASGFQEHANRNGVDSIVSEISSNLPDDSRSLFDFSSLQQAPSINQQDMKINEKTYPPE
SVIALEELSLCYLDPQGEIQGPFLGIDIILWYEQGFFGMDLPVRLSDAPDGSPFHELGDI
MPHLKVKSGLGSGSNRVIQSEPSDAIGRNLKVDVHNFDYDGSSVSDDQPWSSSRPDNTSS
VGIPSQIPNQSYHSEVKFSDDQCFSNIVAHDEDITLSKLAGSINEKPLMRPMDVNASYSH
PGGKPVSNEVAMNDTHNNEADKLHPFGLLMSELRDGSHLRRAQSSNSSLRLGDQGQFLDP
LIDREAPFADQSSVGGMVNQPSFRETWADEYGINRHFNPNPHVGSLEDQFLSHMGPKFNN
FDVAEHLMLHKLQKERLQQQSNISNHFPAHLNGSDLERFPGFALSQSKSSNIQQMMQNSG
SDFERMLELQIQQRQLELQQQQDMHHQQLLHQQMKLQPQQQSQVQQLLLEQFMHQQMPDP
NFGQSKHDPRDNLLDQVQLRRYMHDLQQNSHSLRHHDPSMEQIIQANMGINAAQGRQADL
SDLLLQARHGNLLPSEQQLHFQQDQLQAQQISLALRQQLGLEGERHFGRSWPINETGQLV
RNPAAHQLGHSKGFNVSDIHQQQQRLVTQEEQLNYLGRNLPEQNQRGFYDNPMMFERSAP
ISAQGRELHDRRRYLHPGDQLGSISSHHLQSSDDLFGLHSDAFKSSLSGNNGHVENSWID
PRLQLQHLEAVRQRRELVDTVTSADLNISASGGIHEESSARGFMDLLHQKLGVQSTQPST
VDKWHHPLSSRSDKSWHVPEASSRMHPFELPPDQQVHLNDPFLERAQSANSSALMHDHLT
SMHITDQYNNLGNTERIPLRSRSGSLLEEQSVLSANKDALHPNYRIPFQIGKSSMEKDLL
ELEATKGQRHEYMGPINNIVPGMSDMSEQVENIMNSVELPAIAHSRHSSLSSAGGDGGSL
MGLNNLRGDEVSGERIPPSTKGFDNAFHKRAHVSRVLSSPDVQSDQPSVPHVNQNNLINV
TSNEGRRESSGNSSMTDAAGKKEVRFRSSSFSEGAVSETSFIDMLKKPVLPEVVDSHAGS
GVGTESSDAAQAGRSGKKKGKKGKQIDPSLLGFKVSSNRIMMGEIQRPED
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacggcaaggtcaatctccccgacgatctcttctcctccaagctctccgattcc
ctcagagatgaagcttccggaggacatggtggagaaaaagggattgcggcgctacttgat
gattcgaaagatcaagtgtcatctgacaacagcatacccttatccccacagtggctttat
tccaaacctgttgatgcaagggcaactgccaacccagctggggtgaactcaactgatcct
atactgaaagacagttggcgtttggaggggtctcaggacaagaaagactggaggaggaca
gctcctgatgttgacatcagtcgccgctggcgtgaagaggagagagaaacaagcttgctt
gggagaagggatcgcagaaaagaagatcgtcgtttggagaatacttcaacctcagagaat
agatctttgccctctgatcgctggcatgagagccgtggttctggccatgactctcgaaga
gagaataagtggtcatcaagatggggtcctgaagataaagagaaggattctcgaagtgag
aaaagaaatgatgttgagaaggaagatgttcactctgaaaaacagtcttctggtgttggc
aatcgcatggggtctgatcgtgacaatgattctcgtgataaatggaggccacgacatcga
ttggaagctcaagctgctggtgtggccacataccgtgctgcacctggatttgggctggag
aaagggcgtactgaaggctccagtgtgagattttctcctggaagagggagggcaaatatt
aatggaaatctacaaattgtaaggccacctataggctctagtggcggacctgcacttgtg
gataagaataaaatcatattggggaagtctagtcttggtgctggttcatatttctaccca
aggggtaagctccttgacatatatcgcaagcaaaaggtggatccaaattttgatagcttg
cctgctgagatggagcacacatcaccattaactcaacttggctctgttgaaccattagca
tttgttgctcctgctgctgaggaagagactgtccttaaagaaatatggaaaggaaaaatt
actagcagtgaagtctctggttattccttgagaggaaaggatggagggtcaaatgatgat
atttcaggtcctggtattacaagtgaaggaaaaaaacctttaattggcagtggtgcaaag
gttatatcaggaagtgatgtcttagatgattctgatcaaattttaattggttcatcatca
actgctggtagtttattgagaaatataactgaggaagttgcaacttttcaagaaggcaag
ctgaaacatatgccaactattggtgtgcatgggagagatgaaagttatgtcaacagcatt
gcggagggaagcattcttggaaacaaagttgctgaatcaacaacttttgatctccatcag
ggacaagcttctggttttcaggaacatgctaatcggaatggggttgactcaattgtttct
gaaatcagtagtaatctacctgatgattctcgctctctctttgatttttcatctctgcag
caagctccaagcattaatcaacaggacatgaaaattaatgagaagacatatccgcctgaa
agtgttattgctcttgaggagttgagtttgtgctatctggaccctcaaggggaaattcaa
ggaccctttcttgggattgacatcattttgtggtatgaacaaggattttttgggatggac
ttgcctgttcgcttgtctgatgctcctgatggatcaccatttcatgaacttggtgacatt
atgcctcacttgaaagtcaagtcaggattaggttctggtagtaacagggttattcaatca
gaaccatccgatgccattggaaggaatctaaaagtagatgtacataattttgattatgat
gggtcttctgtaagcgatgatcaaccttggtcttcttcacgacctgataatacctcaagt
gttggtattccatcccaaatacccaatcaaagttatcactctgaggtcaagttctctgat
gatcagtgcttcagtaatattgttgcacatgatgaggatatcactttgtcgaaattggct
ggaagcataaatgaaaaacctctgatgaggcctatggatgtcaatgcttcatattcccat
cctggtggaaaacctgtctcaaatgaagttgcaatgaatgacactcacaataatgaggct
gataagttgcacccctttgggttattgatgtctgaactcagagatggttctcatttaagg
cgtgcacaatcttccaatagttctttgagattgggtgaccagggtcaatttctagatcca
ttaattgatagagaagctccttttgctgatcaaagctctgttggtggtatggttaatcag
ccttctttcagggagacatgggctgatgaatatgggataaataggcattttaatcctaat
ccacatgtaggttcattagaggatcagttcttgtcccatatgggacctaaatttaacaat
tttgatgtggcagagcatctcatgttgcacaagcttcagaaagaaaggcttcagcagcag
agtaatatatctaatcatttccctgctcatcttaatgggtcagatttagagaggtttcca
ggttttgctctttctcagagcaagagctccaacatacagcagatgatgcagaattctgga
tcagattttgaacgtatgctggaacttcagattcaacaacgccagcttgagcttcaacaa
cagcaagatatgcatcatcaacaactacttcaccaacaaatgaaacttcagccccagcaa
cagtctcaggttcagcagttgcttcttgaacagtttatgcatcagcagatgcctgatccc
aattttggacagtcaaaacatgaccctagggataacctgttagatcaagtacaattaagg
agatatatgcatgacttacagcaaaattcacattctttaaggcaccatgatccatcaatg
gaacaaattatccaagcaaatatgggcatcaatgcagcacaaggaaggcaagctgatttg
tcagacctcttgttgcaagcaaggcatggaaatctattgccttctgaacaacagcttcat
tttcagcaagatcagctgcaggcacagcagatatctttggctcttaggcagcagttgggg
ttggaaggagaaagacattttggtaggtcatggccaattaatgaaactggacagttggtt
agaaatccagcagcccatcaacttggtcattccaaaggatttaatgtttcagatattcac
caacagcagcagaggcttgtgacacaagaggagcaattaaattatttggggaggaatctt
cctgagcagaaccagagaggcttctatgataatcctatgatgtttgagaggtctgcaccg
atttctgcccaaggaagagaattacatgaccgccgtcgctatttacatccaggtgatcaa
ctgggttctatatcctctcatcacctacaatcatctgatgatctttttggtctccactct
gatgcattcaagagttcactctcaggcaataatgggcatgtggaaaatagctggattgat
ccccggttgcaactacagcatcttgaagctgtgaggcagagaagagagttggtggatact
gttacatcagcagatctaaacatatctgcatctggcggcattcacgaagagagttcagca
cgaggctttatggacctacttcatcaaaaactgggtgttcaatccacacaaccatcaact
gttgataaatggcatcatcctctttcatcaagaagcgacaaatcttggcatgttcctgag
gctagttcaaggatgcatccttttgagcttcctccagatcagcaagtccatttgaacgac
cctttcttggaaagggctcaaagtgctaattccagtgccctaatgcacgatcatttaacc
agcatgcatatcactgaccaatacaacaatctagggaatactgaaagaatccctcttcgg
tctagatctggttcattacttgaagaacaatcagtgttatctgctaataaggacgcttta
catcccaattacagaattccttttcagattggtaaatcatctatggagaaagacttactt
gagttagaggcaactaagggacagagacatgaatatatgggcccaattaacaatatagtt
cctgggatgtcagacatgtcagagcaagtggaaaacatcatgaattcggtggaactgcct
gcaattgcccatagtagacatagctcactgagcagtgcaggtggtgatggtggctcattg
atgggtttgaataatttgcgtggagatgaggtttctggtgaaagaattcctccttcaaca
aaggggtttgataatgctttccataagcgggcccatgtatctcgggttttatcctcacct
gatgtccagtcggaccagccatccgtgccccatgtcaatcaaaataacttaataaatgtg
acatccaatgaagggagacgggaatcgtctggaaattcgtcaatgacagatgctgctggg
aaaaaggaggttcggtttagatcttcttccttcagtgaaggtgctgtgtcagagacatca
tttatagacatgcttaagaaacccgttcttcctgaggtggtggactcgcatgctggcagt
ggagttgggaccgagtcatctgatgcagcacaagcagggcgtagtgggaaaaagaaaggg
aagaaaggaaaacagatagacccttctcttcttggtttcaaggtctccagtaaccggatc
atgatgggtgagattcaacgccctgaagattga
DBGET
integrated database retrieval system
