Cajanus cajan (pigeon pea): 109818636
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Entry
109818636 CDS
T04868
Name
(RefSeq) LOW QUALITY PROTEIN: rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
109818636
Enzymes [BR:
ccaj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
109818636
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
109818636
NCBI-ProteinID:
XP_020239756
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Position
Unknown
AA seq
647 aa
AA seq
DB search
MQSLREINSPGITFNHPGVNLYEHKNQVIMENGIIRVTLSKPEGTVLGISYNGIDNVLEA
HNKFNNRGYIDIVWNASGSTSKLWGIQGSRFSIIEANENQIELSFSRTWNMEAXSSPVNV
DKRYILRRGSSGLYIYAIFERPQHFPALEIDHIRIVFKLKKDRFPYMAIADDMQXAMPTP
EDRTTGKRLDYDEAVLITNPSNPQLQGEVDDKYQYSCENKDNKLHGWINMDSRSNESVGF
WMITPSNEFRSGGPIKQGLTSHVGPTTLNILHTTHYAGKEVTMAFKEGEPFKKVYGPVFA
YLNSVSSGHDSQALWSDAIQQMSEEIKSWPYDFPKSDEFFPANKRGRVEGQLLVQDRYIK
GGKFVYGHNAYVGLALPGNEGSWQRQSKGYQFWSGADKVGHFTIENVVPGDYDLYAWIPG
IFGDYKYNTTITITPGCVIQLGSLIYNPPRNGPTIWEIGIPDRSAAEFYVPDPYPNLMNP
LYIGKPRHKFRQYGLWQRYSELYPNKDLVYNVAVNDYSKDWFWGFGLLCPHHNTYRPTTW
EIKFHLPFFIRGRNTLRLALASATRSNLEVRFNNPLARSPHFSMGLIGRDNAIARHGIHG
LYLPYNIQVPSYLLVVGTNTIYLRQAKGLSPFLGVMYDSIRLETPQT
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtttaagggaaatcaacagtcctggaataacattcaatcatcctggagtgaat
ctgtatgaacacaagaatcaggtcataatggaaaatggcatcattcgtgtcactttgtca
aaaccagagggcactgtccttggaatatcatacaatggaatagataatgtgcttgaagct
cacaacaaattcaataatagagggtatattgacattgtctggaatgcatcaggaagcaca
tcaaaactttggggaatccaaggtagtagattttctattatagaggcaaacgagaatcaa
attgagctttccttttcaagaacatggaacatggaagccntcagttcccccgtaaacgta
gacaaaaggtatattttgcgcagaggtagttccggattatacatatacgctatatttgaa
cgtccccagcattttccagctctggagattgatcacataaggatcgttttcaagttgaaa
aaggacaggttcccctatatggctatagcagatgatatgcaatgagccatgccaacgcct
gaagatagaactacggggaaacgccttgattatgatgaagctgttctaataaccaaccct
agtaacccacagcttcaaggagaggttgatgacaaataccaatactcatgtgagaacaaa
gacaataagcttcatgggtggattaacatggactcaaggtccaatgaatctgtgggcttc
tggatgataacaccaagtaacgagttccgtagtggtggcccaattaagcaaggcctcact
tctcatgttggccctacaaccctcaatatacttcataccactcactacgcggggaaggag
gtaaccatggcattcaaagaaggggaacccttcaagaaagtttatggccccgtttttgct
tatctaaactcagtttcaagtggccatgattcacaagccctatggagtgatgctatacaa
cagatgtccgaggaaattaaaagttggccctatgatttcccaaaatcagatgagtttttc
ccagccaataaacggggaagagtggaaggacaattactagtccaagacagatacattaaa
ggagggaaatttgtatatggccacaatgcttatgttggtttggctctgcctggaaatgag
ggatcatggcaaaggcaaagcaagggttaccaattctggagtggagctgacaaagtgggt
cacttcacaattgaaaatgttgtaccaggagactacgatttatatgcatggattccagga
atttttggggactataaatataacactactataaccatcacaccaggatgtgttatccaa
ttgggttcactaatatacaatcctccaagaaatggacctaccatatgggaaattggcatc
ccagatcgctctgctgcagagttctatgttccagacccttatcccaacctcatgaaccca
ttatacattggaaaaccaagacacaagtttagacaatatggattatggcagcgttattct
gagttatacccaaataaggacctcgtttacaacgttgctgtgaatgattatagtaaagat
tggttctgggggtttgggcttttatgtccacatcacaacacatatcgcccaacaacatgg
gagattaaattccatttgccattttttataagaggtagaaacacactacgacttgccttg
gcctcagctacaagatctaacttggaggttcggttcaataaccctttggctcgttctcca
cacttttctatgggattaataggcagggataatgccatagcaagacatggcattcatgga
ttgtacctgccttacaacattcaagtacctagctacttattggtggtaggaaccaacacc
atctatttgaggcaagcaaaaggtctaagtcctttcttaggagttatgtatgactccatc
cgtttggaaacacctcaaacttag
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