KEGG   Cajanus cajan (pigeon pea): 109818920
Entry
109818920         CDS       T04868                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like 2
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109818920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccaj03019]
    109818920
   03041 Spliceosome [BR:ccaj03041]
    109818920
Messenger RNA biogenesis [BR:ccaj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     109818920
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109818920
Spliceosome [BR:ccaj03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    109818920
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 SF3a60_bindingd BRAP2
Other DBs
NCBI-GeneID: 109818920
NCBI-ProteinID: XP_020240053
LinkDB
Position
Unknown
AA seq 359 aa
MESPSNTNHHALDGDVNDDDKPQPLTGDGASPGKIFIGGLARETTIGQFIKHFGKYGEIT
DSVIMKDRKTGQPRGFGFITYADASVVDSVIEDTHIINGKQVEIKRTIPRGAVGSNSKDF
RTKKIFVGGIPSTVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITYDSEEAVDDL
LSVGNKIEFAGAQVEIKKAEPKKPNPPAPSSKRYNDSRSSYGGGYGDAYDSGFGGNFDMG
GYRSGGAYGGRGSAYGGFGSEFAGYGGYAGSLGPYRGDPSLGYAGRYGGGFGRGYDLGGY
GPNEGYGAYGGGGSSGSAYGSNYDASLGGGYGGPGGGSFYGTRGGYSGAGTGRYHPYGR
NT seq 1080 nt   +upstreamnt  +downstreamnt
atggagtcacccagtaatactaatcaccacgccctcgacggagacgtcaacgacgacgac
aagccccaacctctcaccggcgacggtgccagtcccggaaagatattcatcgggggttta
gccagagaaaccacgattggtcaattcatcaagcacttcggtaaatacggcgagataacg
gattccgtcatcatgaaggaccgtaagaccggccagcctcgcggtttcggcttcataacc
tacgctgatgcctctgtggttgatagtgttattgaggacactcacattatcaatggcaag
caagttgagattaagcggacgataccccgaggtgctgttggctcgaattcgaaggacttc
agaacgaaaaagatttttgttggtgggattccttcgactgtaaccgaagacgaatttagg
gatttctttacacgctatggagaagtcaaagatcaccaaataatgcgggaccactctact
aatcgttcacgtggctttgggtttatcacctatgactctgaagaagctgttgatgatctc
ttatccgtgggaaacaaaattgagtttgctggagctcaggtggaaatcaagaaggcagaa
ccaaagaagcctaatccaccagccccatcatccaagcgctataatgactctcgttcttca
tatggtggtggatacggagatgcttatgacagtggatttggtggtaattttgatatgggt
ggctataggtcaggtggtgcctatggtggtaggggaagtgcttatggtggctttggaagt
gaatttgctgggtatggtggatatgctggttccttggggccttatagaggtgacccttca
cttgggtatgctggtcgatatggtggaggttttggcagaggttatgatcttggtgggtat
ggacctaatgaaggttatggggcatatggtggtggtggctcctctggtagcgcctatgga
agcaactatgatgccagcctagggggtggatatggggggccaggtggaggctctttttat
gggactagagggggatatagtggtgcaggaactggtcgatatcatccttatggaagatag

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