Clostridium caseinilyticum: ACFLKC_01215
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Entry
ACFLKC_01215 CDS
T11275
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ccak Clostridium caseinilyticum
Pathway
ccak03030
DNA replication
ccak03430
Mismatch repair
ccak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACFLKC_01215
03430 Mismatch repair
ACFLKC_01215
03440 Homologous recombination
ACFLKC_01215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccak03032
]
ACFLKC_01215
03400 DNA repair and recombination proteins [BR:
ccak03400
]
ACFLKC_01215
Enzymes [BR:
ccak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACFLKC_01215
DNA replication proteins [BR:
ccak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACFLKC_01215
DNA repair and recombination proteins [BR:
ccak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACFLKC_01215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
XLQ84958
LinkDB
All DBs
Position
253916..254845
Genome browser
AA seq
309 aa
AA seq
DB search
MNFIAIDFETANEKRNSPCSIGIVVVKGSKIIEKVYYLIKPKEMRFMPINIGIHGIRPYM
VKDELEFDKVWGKIKHYFQDSLVIAHNASFDISVLRNTLKLYNIEMPSFQYICTMKLSKN
FYRNIENARLNTVNKFLGYKFEHHDALADAMACGNILLNISKELNSNNINEISKLVGVTL
GCLNENGYRPSSTKGRILKRSSRQAPRENKNILESFNLKAFKDEVVVFTGGLASMTRLEA
TILVRKLNGMVGSSVTKKTTYLITNAKDIEDLNREEMSNKLKRAVDLKKKGQNIKFLNEE
VFLKKCKEK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaattttatagctatagattttgaaactgccaatgaaaaaagaaacagtccatgttct
ataggaattgtagttgtaaaaggtagtaagattatagaaaaggtatattatttaataaaa
cctaaagaaatgagatttatgccaataaatattggaattcatggtataagaccatatatg
gttaaggatgaattagagtttgataaagtttggggaaagattaagcattattttcaagat
agtttagtaatagcccataatgcctcttttgatatatctgtattaagaaatacattaaaa
ctttataatatagaaatgccaagttttcagtatatatgcacaatgaaactttctaaaaat
ttctatagaaatattgaaaatgcaagattgaatacagtaaataaatttttaggctataaa
tttgaacaccatgatgctttagcagatgcaatggcatgcggtaatattttactaaatata
tctaaggaattaaactcaaataatattaatgaaatatcaaaattagttggagtaacttta
ggatgtttaaatgaaaatggatatagaccatcatcaactaaaggtagaattttaaaaaga
tctagcagacaagctcctagggaaaataaaaatatactagaaagtttcaatcttaaagca
tttaaagatgaagtcgttgtatttaccggtggattagcttctatgacaagattggaagca
acaatattagttagaaagcttaatggaatggtaggaagctctgtaactaaaaagacaaca
tacttaattacaaatgcaaaagatatagaggatttaaatagagaagaaatgagcaataaa
cttaaaagagcagtggacttaaagaaaaaaggccagaatataaagtttttaaatgaagaa
gtattcctaaaaaaatgtaaagaaaagtaa
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