Clostridium caseinilyticum: ACFLKC_01985
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Entry
ACFLKC_01985 CDS
T11275
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ccak Clostridium caseinilyticum
Brite
KEGG Orthology (KO) [BR:
ccak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccak03400
]
ACFLKC_01985 (addB)
Enzymes [BR:
ccak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACFLKC_01985 (addB)
DNA repair and recombination proteins [BR:
ccak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ACFLKC_01985 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XLQ85097
LinkDB
All DBs
Position
432531..435974
Genome browser
AA seq
1147 aa
AA seq
DB search
MSLRFIYGRAGSGKSQFCLNSIKKRIEEDVDRPLILLVPEQFSFQAERNLIEVLEGKTGF
KTQVLSFKRMAYRVFNEVGGITAKHMNESGKSMLLYNIIEDYKNDLKVFKKAAKRQGFIT
TVSDIITEFKRYNITPEIIINNLDNIEDDNLKYKMEDLSLIFSEFEKRLHKNYIDSEDDL
TILVEKLHKSKQFDNAEIWIDEFSSFSPQEYSVLEKLLLKSYRINITLCTDYLNEGGFVD
TTDVFSPIKNTENKLLEIIKDNNIKLDKPVALKCDPCARFKNSIELQHLEKNMFSFPYKE
YKDETKDICMLKTLNQFTEIENTAKDIIKLCREKDCRFKDIAVITGDLNGYENIISSVFL
QYNIPFFIDKKREINNNPIIILILSALEVLSKNWTYESVFRYLKTGLLDISNEEIDILEN
YVLANGIKGYTWTINKPWEHKSFSNYELEENVEKELLNKINDIRYKAMEPIVSLNESLKR
KDRAKEFCEVLYEFLCGINLPDKIQGMIEEFKLEGEIEKASEYNQIWNIVVEVLEQIVEV
IGEEKISLKEFFKVLQTGFSEYEIGLIPPALDQVIVGSITRLRSHNINILYIVGVNDGIF
PAPLKEEGILNDDDRQFLLDKGLEIAKDTKSVAFEEQFLVYSTLTTPSKYLRLSYPIADG
EGKTLRPSIIISRIKKIFTNICEENDIVKSNSEEEALKNISSAKPTFNYLISNLRKDVEG
VKIDNAWGDTYKWYLKNDFWIEKLNRLIKGFDYTNQSKYIETKKIRNLYGKPLKISVSRV
EKFSQCPFAYFIQYGLKAKDRKIFNLSYPDLGIFMHSILEKFSHELEKEGLDWNTMDLNW
AEEEIDKLINDELDSKSLEILNSSKRYEYVTKSVKKILKRSIWLIGEHIKRGNFKPSYYE
LSFDVDGHYPPIAMELHSGEVVNLIGRVDRVDLLQKDGATYLKIIDYKSGTKEFKLSDVY
YGLQLQLLIYLDAMLTELAERSGMNGEPGALLYLKLDDPIVKNTVDMSDNEIEKSIIKNL
KMKGLILNDPNVIKDMDNIISGISDIIPVMLKKDGEVSEGRSSVATKEEFETLRKYVRYT
IIEICEEMLEGNIEIKPYKKKDGSSCDYCIYSSVCKFDTEIRGNKYNILLDKKDEEVWDA
IKKKIES
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgagcttaagatttatatatggaagagctggcagtggtaaaagtcaattttgtttaaat
agtataaaaaaaagaatagaagaggatgtagatagaccacttatattattagtaccagaa
caattttcttttcaggcagaaagaaatttaatagaagttttagaaggaaaaacagggttt
aaaacacaagtactaagttttaaaagaatggcttatagggtttttaatgaagttggtggg
ataactgctaaacatatgaatgaatccggtaaaagtatgcttttatataatataattgaa
gattataaaaatgacttaaaagtatttaaaaaagctgctaaaaggcaaggatttattact
actgtttcagatattataacagaatttaaaagatataatataactcctgaaattataata
aataacttagataatattgaagatgataatttaaaatataaaatggaagacttatctctc
atattttctgagtttgaaaaaagattacataaaaattatatagatagtgaagatgattta
actatattagtggaaaaattacataagagtaagcaatttgataatgcagaaatatggata
gatgaattttcaagtttttctcctcaagaatattctgtattggaaaagttgcttttgaaa
tcttatagaataaatataactttgtgtacagattatttaaatgaaggtggatttgttgac
actacagatgtattttctcctattaaaaatacagagaataaattactagaaataataaaa
gacaataatataaaattagataaaccggtagcacttaaatgtgacccttgtgctagattt
aaaaatagcattgaacttcaacatctagaaaaaaatatgttttctttcccatataaagag
tataaagatgaaacaaaagatatttgtatgcttaaaactttaaaccaatttacggaaata
gaaaatactgcaaaggatattataaaactttgtagggagaaggattgtagatttaaagat
atagcagtgattacgggagatttaaatggatatgaaaatataataagttcagtttttttg
caatataatattccattttttatagataaaaaaagagaaataaataataatccaataata
atattaattctttctgcactagaggttttatctaaaaactggacttatgaatctgtattt
agatatttaaaaactggacttttagatattagtaatgaagaaatagatatattagaaaat
tatgtgcttgctaatggtattaaaggatatacttggactattaataaaccttgggaacat
aagtcttttagcaattatgaattagaagagaatgttgaaaaagagttgttaaataaaata
aatgatataagatataaagccatggaacctattgtatctcttaacgaaagtctcaaaaga
aaagatagagcaaaagaattttgtgaagtattgtatgaatttttatgtggtataaatcta
ccagataaaatacagggtatgatagaagagtttaaattagaaggtgaaatagaaaaggca
agtgaatacaatcaaatatggaatatagttgtggaggttttagagcaaatagtagaggtt
ataggtgaagaaaaaatatccttaaaagagttttttaaggtgcttcaaacaggattttca
gaatatgaaataggacttattccacctgcgctagatcaagtaatagtaggaagtataaca
agacttagaagtcacaatataaatattttatatatagtaggggtaaatgatggtatattt
ccagctccattaaaggaagaaggaattttaaatgatgatgatagacagtttttattagat
aagggattagaaatagctaaggatactaaaagtgtagcttttgaagagcaatttttagtt
tactctacattaactactccaagtaaatatttaagactaagttatcctatagcagatgga
gagggaaaaactttaagaccatctataattatatcaaggataaagaaaatatttacaaat
atatgtgaagaaaatgatatagtaaaatctaatagtgaagaagaagcactaaaaaatata
tcctctgctaagccaacttttaattatttaatatctaatttaagaaaggatgtagagggt
gtaaaaatagataatgcatggggagatacttataaatggtatttgaaaaatgatttttgg
attgaaaaattaaatagattaataaaaggatttgattatacaaatcaaagcaaatatata
gaaactaaaaagataagaaatttatatggtaagccattaaaaataagtgtatccagggta
gaaaaattttctcaatgtccttttgcttattttatacaatatggactaaaggctaaagat
agaaaaatatttaatttaagttatccagacttaggaattttcatgcatagtatattagaa
aagttctcacatgaattagaaaaagaaggacttgactggaataccatggatttaaattgg
gcagaagaagaaattgataagttaattaatgatgaattagatagtaaatctttagaaata
ttaaatagttcaaagagatatgaatatgtaacaaagagtgtgaaaaagattttaaaaaga
tctatatggcttataggagaacatataaaaagaggtaattttaaaccaagttattatgaa
ctatcatttgatgtagatggacactatcctcctatagcaatggaacttcattctggagaa
gttgtaaatctaataggaagagtagatagagtagatcttttgcaaaaggatggagctact
tatttaaaaataatagattataaatcaggaacaaaggaatttaaattgtctgatgtttat
tatggtctgcaattacaacttttaatatatttggatgctatgcttacggaattagctgaa
aggtctggtatgaatggagaaccaggagcacttttatacttaaaattagatgatcctata
gtaaaaaatactgtagacatgagcgataatgaaattgaaaaaagcataataaaaaatttg
aaaatgaaaggattaattttaaatgatcctaatgttataaaagatatggataatataata
tccggaatatcagatataatacctgttatgcttaaaaaagatggagaggtatcagaagga
agatcctctgtagccacaaaagaagagtttgaaacattaagaaaatatgtaaggtataca
ataattgagatttgcgaggaaatgttagaaggaaatatagagataaagccatataaaaag
aaagatggatcttcttgtgactactgtatatattcctcagtttgtaaatttgatacagaa
ataagaggaaacaagtataacatattattagataaaaaagatgaagaagtatgggatgct
attaagaaaaaaatagaatcttag
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