Clostridium caseinilyticum: ACFLKC_02405
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Entry
ACFLKC_02405 CDS
T11275
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ccak Clostridium caseinilyticum
Pathway
ccak03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccak00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ACFLKC_02405
09124 Replication and repair
03420 Nucleotide excision repair
ACFLKC_02405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccak03021
]
ACFLKC_02405
03036 Chromosome and associated proteins [BR:
ccak03036
]
ACFLKC_02405
03400 DNA repair and recombination proteins [BR:
ccak03400
]
ACFLKC_02405
Enzymes [BR:
ccak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
ACFLKC_02405
Transcription machinery [BR:
ccak03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ACFLKC_02405
Chromosome and associated proteins [BR:
ccak03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
ACFLKC_02405
DNA repair and recombination proteins [BR:
ccak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ACFLKC_02405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
PDDEXK_1
ResIII
Helicase_C
HBB
Motif
Other DBs
NCBI-ProteinID:
XLQ85174
LinkDB
All DBs
Position
525064..527418
Genome browser
AA seq
784 aa
AA seq
DB search
MESRGDVNISVRNLVEFILRNGNIDIGYLSGSRAQEGIKAHKKIQKIRMESATPLLMTEY
EKEVLLKYSVEYKKILFNVEGRADGIIIENNYVTIEEIKTTTRNLDEIKDNLLHWAQAKC
YAYIYSKQKNLEKINVKLTYYNIKNENIKSIDKTFHIEELEEFFLDIIHKYYVWIDFEYR
FKEKRNKDIKLLKFPFKEYRQGQRKLAVSVYKTISEGKNIFIEAPTGIGKTISTIFPSIK
AIGEGDIDKIFYLTAKNTTRDFVLNNFKNIIDEDTSFKVITLISKEKICLKEEFKCTPDN
CEFADGHFDRINEAILDVLNNENIIDESIVKKYALKHKVCPFEFSLDISLWCDGIICDYN
YVFDPRVYLRRFFSDGKEDFVLLIDEAHNLLDRSRDMFSSSISKNNILYLKKSIKEKNKA
LYRILGKINKELLDIKKIYEIDNYYMEKERPEKLQILLSNFTSEIEVLMMKGNFQMNDEL
LSFYFEALYFLKICELYGDNYITYGGEYNNDFKIKLFAIDTSTLLNEILKKSKSSIFFSG
TLSPIKYFREVLGGEEEDYILKLNSPFPIDNHRILIGYSISTKYKDRCKSYENICDYINT
ACKIKEGNYMVFFPSYKYMNEVFLIYKEKYPGENIIVQNSSMDEKEREEFINKFEKRIED
TIGFCVLGGIFSEGIDLTGDKIIGAIIIGVGLPQICVERNLIKNYYDDKKQAGFDYSYIY
PGMTKVMQAAGRVIRTEMDQGIILLIDERFNSYSYKKLFPKHWYPNISVKNKRELETALK
EFWN
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
gtggagagcagaggagacgtaaatatatccgttagaaatctagtagaatttatattaaga
aacggaaatatagatattggatatttgagtggaagtagagctcaagaggggataaaagca
cataagaagatacaaaagattaggatggaaagtgctacccctttacttatgacagaatat
gagaaggaagttttattaaaatattctgtggaatataaaaaaattttatttaatgtagag
ggaagagcggatggaattattatagaaaataattatgtaactatagaagagattaagacc
acaactagaaatttggatgaaataaaagataatttattacactgggctcaagctaaatgc
tatgcttatatttattccaaacagaagaatcttgaaaaaattaatgttaaattaacttac
tataatattaaaaatgaaaatataaaaagtatagataaaacttttcatatagaagagcta
gaagaattttttttagatattatacataaatattatgtttggatagattttgaatatagg
tttaaggaaaaaaggaacaaggatattaaattattaaagtttccatttaaggaatatagg
caggggcaaagaaagttagctgtatctgtttataaaaccataagtgaaggtaaaaatata
tttatagaggcacctacaggaataggaaaaactatctctacaatatttcctagtattaag
gctataggagaaggggatatagataaaattttttatttaacagctaagaatactacaaga
gattttgttttgaataattttaaaaatattattgatgaggatacttcttttaaagttata
actttgatttccaaggaaaagatttgtcttaaagaagaatttaaatgtacaccggataac
tgtgagtttgcagatggtcattttgatagaataaatgaagctatattagatgttttaaat
aatgaaaatataatagatgaatctattgttaaaaaatatgctttgaaacacaaagtttgt
ccatttgaattttccttagatataagtttatggtgtgatggaataatatgtgattataat
tatgtttttgatcctagagtatacttaagaagatttttttctgatgggaaggaagacttt
gtgcttttaatagatgaagcacacaatttattggataggtctagagacatgttttcttcc
tctatatctaaaaataatattttatatttaaaaaaatctattaaagaaaaaaataaagct
ttatatagaattctaggaaaaataaataaagaacttttagatattaaaaaaatttatgaa
atagataattactatatggaaaaagaaagaccagaaaaattacaaatattattaagtaat
ttcacatcagaaattgaagtgcttatgatgaaaggaaattttcaaatgaatgatgaattg
cttagtttttattttgaagctttgtattttctaaagatatgtgagctatatggagataat
tatataacctatggaggagaatacaataatgattttaaaatcaaactttttgctatagat
acttcaaccttactaaatgaaattttgaagaagtcaaagtcaagcatatttttttcagga
actttgtctcctataaaatattttagagaagttttagggggagaggaagaagattatatt
ttaaagttaaattcaccatttccaatagataaccatagaattttgataggatatagtatt
tctacaaaatataaagatagatgtaaaagttatgaaaatatatgtgattatataaataca
gcctgtaaaataaaagaaggaaattatatggtgtttttcccgtcctataaatatatgaat
gaagtttttttaatatataaagaaaaatatccaggtgaaaatattatagttcaaaattct
tctatggatgaaaaagaaagagaagaatttataaataaatttgaaaaaagaatagaggat
acaataggattttgtgtattagggggaatcttttctgaaggaattgatttaacaggggat
aaaataataggagccataataataggcgtaggattgccacaaatatgtgtggagcgaaat
ttaataaaaaattattatgatgataaaaaacaggctggatttgattattcatatatttat
ccaggaatgactaaggttatgcaggccgctggaagggtaataaggacagaaatggatcag
ggcataatattacttattgatgaaagatttaatagttattcctataaaaaattatttcct
aaacactggtatcctaatattagtgtaaagaataagagagaattagaaacagctttaaag
gagttttggaattaa
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