Clostridium caseinilyticum: ACFLKC_07415
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Entry
ACFLKC_07415 CDS
T11275
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ccak Clostridium caseinilyticum
Brite
KEGG Orthology (KO) [BR:
ccak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccak03000
]
ACFLKC_07415
Transcription factors [BR:
ccak03000
]
Prokaryotic type
Helix-turn-helix
Other families
ACFLKC_07415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
HTH_8
Sigma54_activ_2
AAA_5
GAF
Mg_chelatase
PAS_8
AAA_2
AAA
PAS
PAS_9
PAS_10
PAS_7
HTH_17
bpMoxR
HTH_7
AAA_7
HTH_30
RWP-RK
HTH_28
HTH_50
MAPKK1_Int
HTH_29
AAA_16
Motif
Other DBs
NCBI-ProteinID:
XLQ86107
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Position
1634061..1635977
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AA seq
638 aa
AA seq
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MKNYLKFIHNSWEKFIKTGNMDSKVREEIAESWIRCKNYGVDYMNGKGSNINKVPIEFKF
KENAELISVARPIMKGIYNIVEGSDFAIVLSDKDGYIIEVIGDKDRMKRVDELNFVKGAL
WTEEAVGTNAIGAALYLDKPIQTIGAEHFCINQHSWTCSACPIHDEYGNLIGCLNMSGNC
YNAHSHTLAIVIASAQAIEKQLALTISYNLINITFDSISEGMIILDKNLNIKRINNRAEK
ILHIKDKYILGINIKNVLKNISFEEILKDGYINIESDFYIKDNRVKCILNAVPIKVNEKI
TGIVITFKEATSVHKLVNKVIGYKASYTFDNILTANDKMIEMIEIAKKAAKSQCNILIEG
ESGTGKEVVAQSIHNYSIRSEGPFVAVNCASIPRELVESELFGYERGAFTGASKEGHPGK
FELADGGTIFLDELGELPLDIQSKLLRVLDNNKIIRVGGSYERQLNVRVVGATNRNLKDE
MKKKNFREDLYYRLGVINIKMLPLRYRKEDIETLANSFIKNLNSKNLQQNKRVKRSYIDK
LKDYDWPGNVRELRNVVERDYYLSDTDTVLSYYIEENVFEEINNENYKDINVIPMERLEK
KNIENAIQKCHGNLAKAAKLLNIGRSTLYRKIKKYGIK
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaattacttaaaatttatacataactcttgggaaaaatttattaagactggaaat
atggatagtaaggtaagagaggaaatagcagagtcttggataagatgtaaaaattatggc
gtagattatatgaatggaaagggaagtaacataaataaggttccaatagaatttaaattt
aaggaaaacgcagaacttatttctgtagcaagacctataatgaaaggtatatataatatt
gttgaaggatctgattttgctatagttttatcagataaagatgggtatataattgaagtt
attggagataaagatagaatgaaaagagttgatgaattaaattttgtaaagggcgctctt
tggactgaagaagctgttggaacaaatgccataggtgcagctctttatctggataaacct
atacaaactattggagcagaacatttttgtataaatcaacattcatggacttgttcagct
tgccctatacatgatgaatatggaaacctaataggctgtttaaatatgtctggcaattgc
tataatgctcactctcatacattagctattgtaatagcgtctgcacaagctatagaaaaa
caactagctttaactatttcttataatcttataaatataacttttgattctatttctgag
ggtatgattattttagataaaaatttaaatataaaaagaattaataatagagcagaaaaa
attttacatataaaagataaatatattttaggtataaatattaaaaatgtgctaaaaaat
attagttttgaagaaatattgaaagatggttatatcaatatagaaagcgacttttacata
aaggataatagagttaaatgtattctaaatgcagtaccaataaaggttaatgaaaagatt
acaggtattgttataacttttaaagaggcaacttccgttcataaattagttaacaaagtg
ataggatataaagcttcttatacttttgataacatattaactgcaaatgataaaatgatt
gagatgattgagatagctaagaaagctgctaaaagtcagtgtaatatacttatcgaagga
gaaagtggcacaggaaaagaagtagttgcacaatctatacataattatagtattagatca
gaaggtccttttgtagctgtaaattgtgcatctattcctagagagcttgttgaaagtgaa
ctttttggatatgaaagaggagcttttacgggagcttcaaaagaggggcacccaggaaaa
tttgagttagcagatggaggaacaatatttttagatgaactaggagaacttcctttagat
atacaatcaaaattattaagagtgttagataataataagattataagagtgggaggaagt
tacgaaaggcagctaaatgtaagagttgtaggagctacaaatagaaatttaaaagatgag
atgaaaaagaaaaattttagagaggatctctattacagattaggcgtaataaatataaaa
atgttgccattaagatataggaaagaagacatagaaactttagccaatagttttataaaa
aatcttaattcaaaaaatttacagcaaaacaaaagagtaaaaagatcatatatagataaa
ttaaaggattatgattggcctggtaatgtgagagaacttagaaatgtggtagaaagagat
tattatttaagtgatacagatactgtgttatcttattatattgaagaaaatgtatttgag
gaaataaacaatgaaaattataaagatataaatgttattcctatggaaagattggaaaag
aaaaatattgaaaatgctatacaaaaatgccatggtaatttagctaaggctgcaaaatta
ttgaatattggtcgatctacattatatagaaaaataaaaaagtatggtataaaataa
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