Clostridium caseinilyticum: ACFLKC_08520
Help
Entry
ACFLKC_08520 CDS
T11275
Name
(GenBank) response regulator transcription factor
KO
K20488
two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
Organism
ccak Clostridium caseinilyticum
Pathway
ccak02020
Two-component system
ccak02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ccak00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACFLKC_08520
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACFLKC_08520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ccak02022
]
ACFLKC_08520
Two-component system [BR:
ccak02022
]
OmpR family
NisK-NisR (lantibiotic biosynthesis)
ACFLKC_08520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
PDE8A_N
TP_0454_N
DUF6501
PUB_1
Motif
Other DBs
NCBI-ProteinID:
XLQ86322
LinkDB
All DBs
Position
complement(1874591..1875280)
Genome browser
AA seq
229 aa
AA seq
DB search
MQEKILIVDDEDDIVSFIKDYFEDQGYSVTTASNGMKAIELCNKDIDIILLDIMMPNIDG
FQVCQKIRDKISCPIIFLSARQSEVDKIKGLSVGGDDYIVKPFSIKELKARIQAHLRREK
RVHLNNKSKISFGKLNLDLSSRKVYYEEEEIIFTAKEFDIVELLVLHPEQVFSKEQIYEK
IWGYNADGDASTVAEHIKKIRAKFIKINISLNHITTVWGVGYRWEKNKI
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaaaaatattaatagtagatgatgaagatgatatagtatcttttataaaagat
tattttgaggatcaaggttatagcgttactacagctagtaatggcatgaaggctatagaa
ttatgtaataaagatatagatattatcttgcttgatataatgatgcctaatattgatggc
tttcaggtttgccaaaagataagggacaaaatatcctgtcctataatatttctaagtgct
agacaaagtgaagttgataaaattaaaggcctttcagtaggtggtgatgattatatagta
aagccctttagtataaaggaattaaaagcaagaattcaggcccatcttagaagagaaaaa
agagttcacttaaataataaatcaaaaataagctttggaaaacttaatttagatttaagc
agtcgtaaagtttactatgaagaggaagagattatttttacagctaaagaatttgacata
gtagaacttttagtattacatccagagcaggtgttttctaaagaacaaatctatgaaaaa
atttggggatataatgcagacggggatgcaagtacagtagcagaacatataaaaaagata
agggcaaagtttataaaaataaatatatctcttaatcatataactacggtatggggagta
ggctatagatgggagaaaaataaaatatga
DBGET
integrated database retrieval system
