Clostridium caseinilyticum: ACFLKC_10835
Help
Entry
ACFLKC_10835 CDS
T11275
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ccak Clostridium caseinilyticum
Pathway
ccak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACFLKC_10835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccak03019
]
ACFLKC_10835
03016 Transfer RNA biogenesis [BR:
ccak03016
]
ACFLKC_10835
Enzymes [BR:
ccak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACFLKC_10835
Messenger RNA biogenesis [BR:
ccak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACFLKC_10835
Transfer RNA biogenesis [BR:
ccak03016
]
Prokaryotic type
tRNA degradation factors
ACFLKC_10835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
KH_2
KH-I_KHDC4-BBP
S1_RRP5
EXOSC1
Motif
Other DBs
NCBI-ProteinID:
XLQ83424
LinkDB
All DBs
Position
complement(2405555..2407663)
Genome browser
AA seq
702 aa
AA seq
DB search
MIHTLETTVAGRKMKVDFGKTGMLSNAAIFMSYGDTVVMINANASKAPREGIDFFPLSVD
YEERLYSVGKIPGGFIKREGKPSDKSILHARSIDRPLRPLFPKGYRNDVQIVNTVLSVEQ
DNLPEILAINGSSLALCLSSIPFTTPVAAVSVGLVDGEFIINPTVVQRENTILDLTVCAT
KERVMMVEAGGHEIDEETMYNAIMFGFEECKNIVAFQEEAVAKFGKTKDEPILYKADEEV
EKEVKEFAFDMIKEAMYIMDKDERNAQLDKVKEKISEEFSEKYEDKKSDIAEVIYKAQKE
IVRNMLLNENRRPDGRSFDEVRPISCEVGILPRTHGTGLFTRGLTQVMTVATLGALGDVQ
ILDGIAEEASKRYMHHYNFPSYSVGEVRPLRGPGRREIGHGALAERALEPLIPSEQEFPY
TIRLVSEVLSSNGSTSQASVCGSTLALLDAGVPIKRPAAGIAMGLITSDDLEKEKVITDI
QGIEDFFGDMDFKVAGTEKGITSIQFDTKIAGLSDNCVKDALEGAKKARLHILGKIKECI
PEPRKELSKYAPRTEIICIDPEKIRDVIGAGGKVINKIIADTNVKIEIKEDGKVFVTSNN
EPEGVKKAISIIEGLTKEVVQGEIYLGKVTKITNFGAFVEILPGKEGLVHISKLDFSRVE
KVEDVVSVGDEILVKVTEIDNQGRINLSRKDAIAKKEEEKDK
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgattcatacattagaaactactgtagcaggaagaaaaatgaaagtagactttggtaag
acaggaatgctttcaaatgctgccatatttatgagttatggagatacggtagttatgata
aatgccaacgcttctaaagcaccaagggagggaatagattttttcccattaagcgttgat
tatgaagaaagactatattcagtaggaaaaattccaggaggattcattaaaagagaagga
aaaccttctgacaaatctatattacatgccaggtctatagatagaccattaagaccttta
tttccaaagggatatagaaatgatgttcaaatagttaatacagttttatctgtagagcaa
gataatttaccagaaatattagctataaatggctcttctttagctttatgcctatctagc
ataccatttacaacaccagtagctgcagtttctgtaggactagtagatggagaatttata
ataaatccaactgtagtccaaagagaaaatactatactagacttaactgtatgtgctaca
aaagaaagagttatgatggtagaagcaggtggacatgaaatagatgaggaaactatgtac
aatgctatcatgtttggttttgaagaatgtaaaaacatagttgcattccaagaagaggct
gtggctaagtttggaaaaactaaagatgaacctatattatataaagcggatgaagaagta
gagaaagaagttaaagaatttgcttttgatatgataaaagaagccatgtatataatggat
aaagatgaaagaaatgctcagttagataaagttaaagaaaaaatatcagaagagttttca
gaaaaatatgaagacaagaaatcagatatagcagaggttatatataaagctcaaaaagaa
atagttagaaatatgcttttaaatgaaaatagaagaccagatggaagatcttttgatgaa
gtaagacctataagctgtgaagtaggaatacttcctagaactcatggtacaggtttattt
acaagaggattaactcaagtaatgactgtagctactttaggagctttaggagatgtacaa
atattagatggtatagcagaagaagcgtcaaaacgttatatgcatcattacaatttccca
tcttatagtgttggagaagttagacctttaagaggaccaggaagacgtgaaattggtcac
ggagctttagctgagagagctttagagccattaattccatctgaacaagaattcccatat
actataagattagtatcagaagtactaagctcaaatggttcaacatcacaggctagcgtt
tgtggaagtacattagctctattagatgcaggtgtacctataaaaagaccagctgcaggt
atagctatggggcttataactagtgatgatttagaaaaagaaaaagtaataacagatatt
caaggtatagaagatttctttggagatatggactttaaagtagcaggaacagaaaaagga
attacatctatacaatttgatacaaaaatagctggattatcagataattgtgtaaaagat
gcattagaaggtgctaaaaaggcaagactacacatattaggaaagataaaagaatgtata
ccagaaccaagaaaagaattatctaaatatgcgccaagaacagaaataatatgtatagat
ccagaaaaaataagagatgttataggtgctggtggaaaagtaataaataaaataatagca
gatacaaatgtaaaaatagaaataaaagaagatggtaaagtatttgtaacatctaacaat
gagccagaaggtgttaaaaaagctataagtataatagaaggattaacaaaagaagtggtt
caaggagaaatatatctaggtaaggtaacaaaaattactaactttggagcatttgtagaa
atcctaccaggtaaagaaggtctagtgcatatatctaaattagatttttctagagtagag
aaagtagaagacgtagtatctgtaggagacgaaatactagttaaagttacagaaatagat
aaccaaggaagaataaatttatcaagaaaagatgctattgcaaaaaaagaagaagaaaaa
gataaataa
DBGET
integrated database retrieval system
