Clostridium caseinilyticum: ACFLKC_11010
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Entry
ACFLKC_11010 CDS
T11275
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ccak Clostridium caseinilyticum
Pathway
ccak02024
Quorum sensing
ccak03060
Protein export
ccak03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ccak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ACFLKC_11010 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ACFLKC_11010 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACFLKC_11010 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ccak02044
]
ACFLKC_11010 (ffh)
Enzymes [BR:
ccak01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
ACFLKC_11010 (ffh)
Secretion system [BR:
ccak02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ACFLKC_11010 (ffh)
Eukaryotic Sec-SRP protein
ACFLKC_11010 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
AAA_30
AAA_17
nSTAND3
APS_kinase
AAA_16
AAA_31
Zeta_toxin
AAA_33
AAA_18
ResIII
AAA_25
NPHP3_N
ParA
ATPase
MMR_HSR1
MeaB
AAA_24
ArsA_ATPase
6PF2K
AAA_14
NACHT
ATP_bind_1
Arf
YqeC
AAA_5
TsaE
DUF1615
Glycos_trans_3N
AAA
Motif
Other DBs
NCBI-ProteinID:
XLQ83458
LinkDB
All DBs
Position
complement(2443314..2444663)
Genome browser
AA seq
449 aa
AA seq
DB search
MAFDGLASKLQDALKKLRGKGKLSEKDIKEAMREVKLALLEADVNYKVVKNFIKNVTEKC
MGNEVLESLTPGQQVIKIVNEELTELMGSTESTLNSSTSGLTVIMLVGLQGAGKTTMAGK
LALHLRQRNKRPLLVACDVYRPAAIKQLQVVGKQIDIPVFTMGDKLNPVDISKAAIEHAK
NNKNNVVIIDTAGRLHIDEDLMDELHNIKEEVNPNEILLVVDAMTGQDAVNVANNFNEKL
DISGVILTKLDGDTRGGAALSIKSMTGKPIKFVGLGEKMNDLEVFYPDRMASRILGMGDV
LSLIEKAQQSIDEEKAKEIGERMLNQEFNFEDFLESMQQMKKLGPINKLLEMMPGMNSKE
LKNIDLSSSEKEMKKTEAIINSMTIKERRNPSLISSSPSRKRRIAKGSGTNVQNVNKLLK
DFQASKKMMKQMKGMEKGFKKGLFGKLPF
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgatggattagcttctaaacttcaggatgctttaaaaaagcttagaggtaaa
ggtaagctttcagaaaaagatataaaagaagccatgagggaagttaaacttgcattatta
gaagcagatgttaactataaagttgttaaaaactttataaaaaatgttactgagaaatgt
atgggtaatgaagtacttgaaagtttaacacctggtcaacaggttataaaaatagtaaat
gaagagttaacagagcttatgggaagtacagaaagtactttaaattcttccacttcagga
ctaacagttataatgcttgtaggtcttcaaggggcaggaaaaacaactatggcaggaaaa
cttgctcttcatcttagacagagaaataaaagacctttgcttgtagcctgtgatgtatat
agaccagcagcgataaaacaacttcaagtagttggtaaacaaattgatattccggtattc
actatgggggataaattaaaccctgtggatatatctaaggctgctatagaacatgctaaa
aataataaaaataatgtggttataatagatacagcaggaagacttcatatagatgaagat
cttatggatgagcttcataacataaaagaagaagtaaacccaaatgaaatattattggta
gtagatgctatgacaggccaagatgctgtaaatgtagctaacaattttaatgaaaagcta
gatataagtggtgtaatacttacaaaactggatggagatacaagaggtggagctgcactt
tctattaaatccatgacaggtaagcctataaaatttgtaggtttaggggaaaaaatgaat
gatttagaagtattctatccagatagaatggcttcaagaatacttggtatgggagatgtg
ctttctttaattgaaaaagcacagcaatctatagatgaagagaaggctaaagaaattgga
gaaagaatgttaaatcaagaatttaacttcgaagatttcttagaatctatgcagcaaatg
aaaaaattaggtcctattaataagttattagaaatgatgccaggaatgaattccaaagaa
ttaaaaaatatagatttaagttctagtgaaaaagaaatgaaaaaaacagaagctataatt
aattcaatgactataaaagagagaagaaacccttcattaatatcttcatcaccttctaga
aaaagaaggatagcaaaggggtcagggacaaatgttcagaatgtaaataagcttcttaaa
gattttcaggcttctaaaaaaatgatgaagcaaatgaaaggtatggaaaaaggatttaaa
aaaggtttatttggtaaattaccattttaa
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