Clostridium caseinilyticum: ACFLKC_11480 Help Entry ACFLKC_11480      CDS       T11275                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism ccak  Clostridium caseinilyticum Pathway ccak03018   RNA degradation Brite KEGG Orthology (KO) [BR:ccak00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     ACFLKC_11480  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccak03019]     ACFLKC_11480 Messenger RNA biogenesis [BR:ccak03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      ACFLKC_11480 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 Lactamase_B_6 CFAP54_N Motif Other DBs NCBI-ProteinID:  XLQ83549 LinkDB All DBs Position complement(2547419..2549128) Genome browser AA seq 569 aa AA seqDB search MRVDKERDKPKDRVKDKEKDKVKIIPLGGLNEIGKNLTVIEYKNDIVVIDCGLKFPDDDM LGIDVVIPDITYLKKNINKVKGIFLTHGHEDHIGALPYVLREVNVPVYGTKLTLGIVETK LKEHGLLSSVELKCIRPREIIRLQNVSVEFIRTSHSIADTVAIAIHTPLGVILHTGDFKI DYTPIDGHVTDLARFAEMGKRGVIAMMADSTNVERPGYTMSESTVGEAFLNIFSGVKGRI IVATFASHIHRIQQIIRAAEKFKRKVAVSGRSMENIMEVAMKLGYIKAEKNIFISIDAIN KYPDDQVVIITTGSQGEPMSALSRMAASEHKKVNIKPGDKVIISATPIPGNEKLVSRVIN QLFKKGADVIYETLADIHVSGHACQEELKLMHTLVRPKYFIPVHGEYRHLKQHGELACQL GLPENHVMVSDIGDVIEVSRECIRKNGSVVSGQVFVDGLGVGDVGNIVLRDRKHLSQDGI LTVVVTIEKVSGSVIAGPDIISRGFVYVRESEDLMEEAKKLVKKALEECEKNHITEWAAI KTNIKDVLRGFLYEKTKRKPMILPIIMEI NT seq 1710 nt NT seq  +upstreamnt  +downstreamnt ttgcgagtggacaaagaaagagataaaccaaaagatagagtaaaagataaggagaaggat aaagtaaagattattcctttaggcggcttaaatgaaattggcaaaaacttaactgttata gaatataaaaacgatatagtagttatagattgtggccttaaatttccagacgacgatatg ttaggaatagatgtagttattcctgatataacttatcttaaaaagaatatcaataaagta aaaggaatatttttaactcatggtcatgaagaccatataggagcattaccttatgttttg agagaagtaaatgtaccagtgtatgggactaagcttacattaggtatagtagaaactaaa ttgaaagaacatggattattaagctctgtagagttaaagtgcataagaccaagggaaata attagacttcaaaatgtttctgtggaatttataagaactagtcatagtatagcagacaca gtagctatagctatacatacacctttaggggttattctccatacaggggattttaaaata gattatactcctatagatggtcatgttacagatttagctagatttgctgaaatgggaaaa cgtggcgttattgctatgatggcagatagtacaaatgtagaaaggccaggctataccatg tcagaaagtactgtaggggaagcttttctaaatatattctcaggagtaaaaggaagaata attgttgctacttttgcatctcatattcatagaatacaacaaataataagagctgctgaa aaatttaaaagaaaagtagcagtttccggtagaagtatggaaaatattatggaagtagct atgaagcttggatatataaaggcagaaaaaaatatatttataagcatagatgctataaat aaatatccagacgaccaagtagttattataactactggaagccaaggagagcctatgtca gctctttcaagaatggcagcttcagagcataaaaaagtaaatataaagcctggtgataag gtaattatatctgcaacacctattccaggtaatgaaaaattggtatctagggttataaat cagttatttaaaaaaggtgcagatgttatatatgaaacacttgcagatattcatgtatct ggtcatgcatgccaggaagaacttaaacttatgcatacattagtaagacctaagtatttt atacctgttcatggagaatatagacatttaaaacaacacggagaacttgcttgtcaatta ggattgccagaaaaccatgttatggtttcagatataggtgatgttatagaggtaagtaga gaatgtattagaaaaaatggttctgtagtgtcaggtcaggtgtttgtagatggattaggt gtaggagatgtaggaaatatagtattaagagatagaaaacatttatctcaagatggtata ttaacagtagttgttactatagaaaaagtttcaggctctgttattgcaggtcctgacata atatcaagaggctttgtttatgtaagagaatcagaagatctaatggaagaagctaaaaag ttagtaaaaaaagctctagaagaatgtgaaaaaaatcatattacagaatgggctgcaatt aaaacaaatataaaagatgttttaagaggattcttatacgaaaaaacaaagagaaaacct atgatattaccaattattatggaaatatag

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