Clostridium caseinilyticum: ACFLKC_11600
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Entry
ACFLKC_11600 CDS
T11275
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ccak Clostridium caseinilyticum
Pathway
ccak00260
Glycine, serine and threonine metabolism
ccak00460
Cyanoamino acid metabolism
ccak00630
Glyoxylate and dicarboxylate metabolism
ccak00670
One carbon pool by folate
ccak00680
Methane metabolism
ccak01100
Metabolic pathways
ccak01110
Biosynthesis of secondary metabolites
ccak01120
Microbial metabolism in diverse environments
ccak01200
Carbon metabolism
ccak01230
Biosynthesis of amino acids
ccak01240
Biosynthesis of cofactors
ccak04981
Folate transport and metabolism
Module
ccak_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ccak00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ACFLKC_11600 (glyA)
09102 Energy metabolism
00680 Methane metabolism
ACFLKC_11600 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ACFLKC_11600 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
ACFLKC_11600 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
ACFLKC_11600 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
ACFLKC_11600 (glyA)
Enzymes [BR:
ccak01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
ACFLKC_11600 (glyA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
BRICHOS
Motif
Other DBs
NCBI-ProteinID:
XLQ83573
LinkDB
All DBs
Position
complement(2576982..2578223)
Genome browser
AA seq
413 aa
AA seq
DB search
MDFTNLTNNDSTILGMIKKEAERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHK
RYYGGCEFVDEVEDLARERLKKLFGAEHANVQPHSGSQANMAVYMSVLQPGDTILGMDLT
HGGHLTHGSPVNFSGKLYNFISYGVDKETEIIDYELLRKIALENKPKMIVSGASAYPRII
DFEKIREICDEVDAYMMVDMAHIAGLVATGLHPSPMPYADFVTTTTHKTLRGPRGGAILC
KEKYAKAVDKAIFPGIQGGPLMHIIAAKAVCFGEALKEDYKTYMNQVIKNTKALGEELIK
YGFRLISGGTDNHLLLIDLTNKKITGKDAEKLLDSVGITVNKNTIPFETLSPFVTSGIRI
GTPAVTTRGFKEEEMKKIAYFINYSIEHREEDLSQIKEQVKEVCKKYPLYQNA
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggactttacaaatttaacaaacaacgattcaacgatattagggatgataaaaaaagag
gcagaaagacaagaatataatattgaattaatagcttcagaaaactttacaagtttatcc
gtaatggaagctatgggatctttattgacgaataaatatgcagaaggatatccacataag
agatattatggaggatgtgaatttgtagatgaagtagaagatttggcaagagaaagattg
aagaagttatttggtgcagagcatgctaatgtacaaccacattctggatcacaagccaac
atggcagtttacatgtctgtacttcagccaggggatactatattaggaatggatttaact
catggtggacatttaactcatggaagtccagtaaatttttcaggaaagttatataatttt
atatcttatggtgtagacaaagaaacagaaattatagattatgaattgttaaggaaaata
gctttagagaataagcctaaaatgatagtatctggagctagtgcatatcctagaattata
gattttgaaaagataagagaaatttgtgatgaagttgatgcttatatgatggtagatatg
gctcacatagcaggacttgtagctacaggattacatccatcaccaatgccttatgcagat
tttgttacaacaactactcataaaactttaagaggacctaggggtggagctattttatgt
aaagaaaaatatgcaaaggcagtagataaagctatattcccaggaattcaagggggacca
ttaatgcacattatagcagcaaaagcggtttgttttggagaagctttaaaagaggattat
aaaacatatatgaatcaagttataaaaaataccaaagctcttggagaggaattaattaag
tacggatttagattaatatctggtggtacagataaccatttattgctaattgatttaact
aataaaaaaataaccggaaaagatgcagaaaaacttttagattcagtaggaattactgtg
aataaaaatacaataccttttgaaactttaagcccttttgtaactagtggtattaggata
ggaactccagcagtaactacaagaggatttaaggaagaagaaatgaaaaagatagcctat
ttcattaactattctatagaacatagagaagaagatttatctcaaattaaggagcaagta
aaagaggtttgtaaaaaatacccattgtatcaaaatgcataa
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