Clostridium caseinilyticum: ACFLKC_13720
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Entry
ACFLKC_13720 CDS
T11275
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ccak Clostridium caseinilyticum
Pathway
ccak03030
DNA replication
ccak03410
Base excision repair
ccak03420
Nucleotide excision repair
ccak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACFLKC_13720 (polA)
03410 Base excision repair
ACFLKC_13720 (polA)
03420 Nucleotide excision repair
ACFLKC_13720 (polA)
03440 Homologous recombination
ACFLKC_13720 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccak03032
]
ACFLKC_13720 (polA)
03400 DNA repair and recombination proteins [BR:
ccak03400
]
ACFLKC_13720 (polA)
Enzymes [BR:
ccak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACFLKC_13720 (polA)
DNA replication proteins [BR:
ccak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACFLKC_13720 (polA)
DNA repair and recombination proteins [BR:
ccak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ACFLKC_13720 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACFLKC_13720 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
Imm50
HTH_12
InlK_D3
Motif
Other DBs
NCBI-ProteinID:
XLQ83973
LinkDB
All DBs
Position
complement(3049829..3052456)
Genome browser
AA seq
875 aa
AA seq
DB search
MNKERLLILDSNSLLNRAFYALPDLMTGEGIHTNAIYGFVNMLLKMKEEINPDYIVAAFD
RKAPTFRHEEYKDYKAGRKKMPEELAQQFPIVKELLSALAINIFEIDGFEADDLIGTLSV
FAEEKGIEVYIVTGDKDALQLATDNVKVVITKKGITEKEIYDKNRMIEEFGVTPKEFIDV
KGLMGDTSDNIPGVPGIGEKTAFKLIKEYKSIESVLENIENIRGKKLKENLHEYSEQAIF
SKKLATIIRNVPIEMSLQEIKSKEDYDINKVRDMFQKLEFKSLINKVGKSNEKETEEEKV
SYKNIVSIEEFKDLKDNIIKYKVDKLYLYFELEDIALFSKSKITTLYINFKDEVYKIDFQ
TLLNNDKEEFIKMCKELFESKENEKITYDSKNPRTILRKLGIEFSGIRFDINLAAYLIDP
VRKEYEIASLASEYLFKNINREDEDLKIKETNIMPKLYEVLEEKIKEQDIEELLYKVEQP
LTETLSAMETEGFKVDKNILLQLEEKFKGEIENTQSEIYSMSEEEFNINSPKQLGKILFE
KLDLPIIKKTKTGYSTNAEVLDKLRDKHPIIDKITYYRQLTKIYSTYIEGLKAAIDEDGK
IHSNFNQTVTATGRLSSTEPNLQNIPIKYEMGREIRKVFIPNTQDSVVLSADYSQIELRV
LAHISNDENMISAFNEHDDIHTKTASEVFKVPIDEVTPLMRSNAKAVNFGIVYGIGDFSL
SQDLNITRKEAKQYIDAYLERYPNVKLYLENIVEEAIKKGYVSTILNRRRYIKEVKSSNK
IVKAAGERLAMNSPIQGSAADIIKLAMVNVHRKLKQENFKSSIILQVHDELILNVYKEEL
ERIKVLVKKEMEQVLKLKVGLDVDINIGNNWYEAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaaagattattaatattagatagtaatagtttattaaatagagctttttat
gcattacctgatcttatgactggagagggaattcatactaatgctatatatggttttgtt
aatatgcttttaaaaatgaaagaagagataaatccagattatatagttgcagcttttgat
agaaaggcacctacctttagacatgaagaatataaggactacaaagcaggtagaaaaaag
atgccagaggaacttgcacagcagtttcctatagtaaaagagcttttgtccgcattagcc
ataaatatattcgaaattgatggatttgaagcagacgatctaataggaactttatctgta
tttgcagaggaaaaaggaatagaagtttacatagttacaggagataaagatgctctacaa
ttggctacggataacgtaaaagtagttataactaaaaagggtattacagaaaaagaaatt
tatgataaaaatagaatgatagaggagtttggagttactcctaaagaatttatagatgta
aaaggtcttatgggagatacctctgacaatatacctggagtacctggaataggtgaaaaa
actgcctttaagcttataaaagaatataaaagtatagaatcagtacttgaaaatatagaa
aatataagaggaaaaaaattaaaagaaaatttacatgaatatagtgagcaggctatattt
agtaaaaaattagctactattatacgtaatgttccaatagaaatgagtttacaagagata
aaatcaaaagaagattatgatataaacaaagttagagatatgtttcaaaaattggaattt
aaatctttaataaataaagtaggtaaaagtaatgaaaaagaaaccgaagaagaaaaagtt
tcttataaaaatatagtttctatagaagaatttaaagatttaaaagacaatataataaaa
tataaagtggataagttatatttatattttgaattagaggatatagctttattttctaaa
tctaaaataaccacattgtatattaattttaaagatgaagtttataaaatagactttcaa
actttgttgaataatgataaagaagaatttataaaaatgtgcaaagaactatttgaaagt
aaagagaatgaaaaaataacctatgattctaaaaatccaaggactatacttagaaaatta
ggaatagagtttagtgggataagatttgatataaatttagctgcatatttaatagatcca
gtaagaaaagaatatgaaatagctagtttggcttcagaatatttgtttaaaaatataaat
agagaagatgaagatctaaaaataaaagagactaatataatgcctaaattatacgaggta
ctggaagaaaaaataaaagagcaagatatagaagaattgttgtataaggtagaacaacct
cttacagagacgttatcagctatggaaacagaaggatttaaagtagataaaaatatactt
ttacaacttgaggaaaaattcaaaggagaaatagaaaatactcagtcagaaatatattca
atgtctgaggaagaatttaatataaattctcctaaacagttaggaaaaatactttttgaa
aaattagatttacctattataaagaaaacaaagacaggatattcaactaatgcagaagta
ttagataagttaagagataaacatccaataatagataaaataacttattatagacaatta
actaaaatatattctacttatatagagggattaaaagctgctatagatgaggatggaaaa
atacattcaaactttaatcaaactgttacagcaacaggtagattgtctagtacggagcct
aatcttcaaaatatacctataaaatatgaaatgggaagagagataagaaaggtatttatt
cctaatacccaggattctgtagtactttcagcagattattcacagatagaattaagagta
ttagcacatatatctaatgatgaaaatatgataagtgctttcaatgaacatgatgatatt
catactaaaactgcatcagaagtgtttaaagttccaatagatgaagtaacacctcttatg
aggagtaatgctaaagcagttaattttggtatagtttatggtataggagattttagttta
tctcaggatttaaatataactagaaaagaagcaaagcaatatatagatgcttatttagag
agatatcctaatgtaaaactttatttagaaaatatagtagaagaggctataaaaaaaggg
tatgtgagtactatattaaatagaagaagatatataaaagaggttaaatcttcaaataaa
atagttaaagctgctggggaaagattagctatgaatagtccaatacaaggaagtgcagct
gatataataaaattggctatggtaaatgttcatagaaaattaaaacaagaaaattttaaa
agcagtataatattacaagtacatgatgaattaatactaaatgtttataaagaagaatta
gaaagaattaaagttttagttaaaaaagaaatggaacaggttttaaaactaaaagttggg
ttagatgtagatataaacataggcaataattggtatgaagccaaatag
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