Clostridium caseinilyticum: ACFLKC_16635
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Entry
ACFLKC_16635 CDS
T11275
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ccak Clostridium caseinilyticum
Brite
KEGG Orthology (KO) [BR:
ccak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccak03016
]
ACFLKC_16635 (truA)
Enzymes [BR:
ccak01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
ACFLKC_16635 (truA)
Transfer RNA biogenesis [BR:
ccak03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACFLKC_16635 (truA)
Prokaryotic type
ACFLKC_16635 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF1473
DUF2344
Motif
Other DBs
NCBI-ProteinID:
XLQ84505
LinkDB
All DBs
Position
complement(3641164..3641904)
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AA seq
246 aa
AA seq
DB search
MKNIKLKLEYDGTNYNGWQKQKNDKFITLQGTLEKVIGDITKEKVEVIGASRTDSGVHAK
GYVCNFFTNTKIPSENLKRVINNNLPKDIVVLSSEEISSEFHSRFCSKGKTYEYTILNSS
QPIAIGRNYIFQFKDKLNIDNMKIASKYFMGTHDFSAFQTKGSSVKTSVRTISKFEINKS
GDFIKFIITGDGFLYNMVRIMVGTLIQIGINKREPESIKYIIKSKDRTKAGKCVPSSGLC
LKEVFY
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatataaagttaaaacttgaatatgatggaacaaattataatggatggcaaaag
caaaaaaatgataagtttattaccctacaaggtactttggagaaagttataggtgatata
actaaagaaaaagtagaggttataggagcaagtagaacagattcaggagttcatgccaaa
gggtatgtatgtaatttttttactaataccaaaataccatctgaaaatcttaaaagagtg
attaataataatttgccaaaagatatagtagttttaagttcagaagaaattagtagtgaa
tttcattctagattttgcagcaaaggtaaaacttatgaatatacgattttgaatagttct
cagcctatagctataggtagaaactatatttttcagtttaaggataagctgaatatagat
aatatgaaaatagcatcaaaatattttatgggaacacatgatttttctgcatttcaaaca
aaaggaagtagtgtgaagacttcagtaagaaccataagtaaatttgaaataaataaaagt
ggtgattttataaagtttataattacaggggatggatttctttataatatggtaagaata
atggtaggaacactgatacaaattggtattaacaaaagagaaccagaatctataaagtat
attataaaatcaaaagatagaacaaaagcaggcaaatgtgttccttcatctggtctatgt
ttaaaggaagtattttattaa
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