Ceratina calcarata (carpenter bee): 108621984
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Entry
108621984 CDS
T06061
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03018
RNA degradation
ccal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108621984
09123 Folding, sorting and degradation
03018 RNA degradation
108621984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccal03019
]
108621984
03041 Spliceosome [BR:
ccal03041
]
108621984
Messenger RNA biogenesis [BR:
ccal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108621984
mRNA degradation factors
5'-3' decay
Lsm complex
108621984
Spliceosome [BR:
ccal03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
108621984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LSM12_LSM
Motif
Other DBs
NCBI-GeneID:
108621984
NCBI-ProteinID:
XP_026666938
UniProt:
A0AAJ7RX69
LinkDB
All DBs
Position
Unknown
AA seq
91 aa
AA seq
DB search
MASSVSTNPSTLLPLELVDKCIGSRIHIIMKNDKEIVGTLLGFDDFVNMLLEDVTESEAT
PEGRRVTKLDQILLNGSNITMLVPGGEMPDT
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaagctctgtcagtacaaatccatcaacgttattacccttagagctagttgataag
tgcatcggctctcggatacacattattatgaagaacgacaaagaaatcgtggggactttg
ttaggtttcgacgactttgtaaatatgttattagaagatgtaacagaaagcgaagcaact
cccgaaggaaggagagtcaccaaactcgatcagatattactcaatggaagtaatataaca
atgcttgtacctggtggagaaatgcctgacacgtaa
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