Ceratina calcarata (carpenter bee): 108622185
Help
Entry
108622185 CDS
T06061
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108622185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccal03021
]
108622185
Enzymes [BR:
ccal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108622185
Transcription machinery [BR:
ccal03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
108622185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
OSTMP1
Motif
Other DBs
NCBI-GeneID:
108622185
NCBI-ProteinID:
XP_017875380
UniProt:
A0AAJ7IS78
LinkDB
All DBs
Position
Unknown
AA seq
1710 aa
AA seq
DB search
MVQQKYHVPRLTPKHLDPKCLMFSMFTANDVRNLSVTKIRTPLSFNVLGHPLKGGLYDPV
LGPLIESSDPCGTCGCNVFKCPGHFGHIELPMPVVNPLFHKELCMLMKLSCLNCFVLQIP
PYIKLLLSANLRLLQKGYFSDLEGLQQEVMIVVSDSSNPYEVDIQAVQNVIENYSTNLFN
RPSLNQSIVEYNDVQLNTKNINTQWHAYVESVLKQHTAPKVCVNCHNPIPKITTLKNKIM
TTKVSDAPNEKTKSRGVIHKLETVLIMPDQSKEYLRNLWENEKEFLKVIVSCFALVDIEH
PTDIFFLEVVPVLPPIVRPVNFVNGQMIEHPQTQVYKSIIQDCLVLRNIIQTIQDGDTEQ
LPEEGKLVFEQIKGNTPIEKLHNAWQSLQVNVDHIMDRDMNKTAESMNCQGLKQVIEKKE
GVIRMHMMGKRVNFAARSVITPDPNLNIDEIGIPEAFALKLTYPTPVTPWNVVQLRQLVL
NGPDVHPGAVMIEHEDGSIQRISTKDPVHREAIAKRLLTTSDKANKFFNGIKIVHRHLQT
GDILLLNRQPTLHKPSIMAHKARILKGEKTLRLHYANCKAYNADFDGDEMNAHFPQNELA
RSEGYFIANVCNQYLVPKDGTPLSGLIQDHMVSGVRMTVRGAFFSREDYMQLVYAALSTM
QDNIILLPPSILKPKPLWSGKQIISTVIINIIPLQRARINLTASAKINVREWQVEKPRRW
KGGGTEFSDPKTMSEAEVIIRNGELLCGVLDKMHYGATPFGLVHCVFELYGATCTSQLLS
AFGKLFQAGLQRNGFTLGIEDILLLRKADKKRREIISNCRKIGEDVHRSVLELPEDTPMD
VVTSQMEESYWKNPKFRAQVDRKYKSALDVYTNDINKTCLPAGLLKKFPENNLQLMVQSG
AKGSTVNTMQISCLLGQIELEGKRPPLMISGKSLPSFPAYDPSPRAGGFIDGRFMTGIKP
QEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLVVNYDSTVRDSDGSLIQIYYGE
DGLDIPGSRFLKKEQLGFLVDNKNAIVDEGMLKHLKTDLESEQISKFAKRIKKWESKHGS
ALRKRRISPFTRFSMQDMNIKASKFKEIDENSGRSKASLSYMRKWLRDTEENKKWIYAEC
AKCPDPVMSRYRQDINFGVLSERLENLIDDYVTNKSTNPFIKKKDLKDLLSTKVMKTVCP
PGEPVGLLAAQSIGEPCSQLTLNTFHFAGRGEMNVTLGIPRLREVLMMASKNIKTPSMEI
PLRKDLDNVTKRSNKLRLKLAKCVLSDVLDNVTVNRKLEESPHRSLVYTMTVNFLPHKSY
KGEFCVQPRDVLKKTEEIFFKELFREIKKVAKVTGALLHVEEEKKSLYEDDALLDQIEPG
EAIESAPKPRANLGEMHESSDEEEAAEDADATVARSISRHKENQEYEDPEEEELEDVIDK
DDDVAMENADQRSNANEERLDDEDDNVENRKTVKSVNETVNEQRKKNVTNLYVYALEYDY
DEAKFTWCKLKFWLPLEMIKMDLPTIIRNVANRVVLWEVPCIKRAFTFQNKDGETILRTD
GINIIEIFKYDRSLDLNRLYSNDIYAISQTYGIEAANRVIIKEVKDVFKMYGITVDSRHL
SLIADYMTFDGRFQPLSRKGMEDSASPLQQMSFESSLNFLRNATLHGRRDNLVSPSSRLM
LGQPCKSGTGACSLLVKIQKQPETTLSIGA
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atggtacaacagaaatatcatgtgcctcgtttaaccccgaagcatttagatccaaaatgc
ttaatgttttcaatgtttactgcgaacgacgtgaggaacttgagcgtgactaaaatcaga
acaccattatcctttaatgttttgggacatccattaaaaggcggattgtacgacccagta
ttaggtcctctgatagaaagttccgatccctgtggaacatgtggatgcaacgtgtttaag
tgtccaggtcactttggacacatagaactaccaatgccggttgtaaatccactgtttcat
aaagaactatgcatgttaatgaaattgtcgtgtttaaattgtttcgttttacaaattcca
ccttatataaaattgttgctatccgcaaacctgcgactgcttcaaaaaggatacttcagc
gatctcgaaggcttacagcaagaagtaatgatcgtcgtttctgactcgagcaatccttac
gaggttgacatacaagctgttcaaaatgttatcgagaattatagcacgaatctgttcaac
agaccgagcctcaatcagtctatcgtggaatacaacgacgttcaattgaacacgaaaaat
atcaatacacaatggcacgcgtatgtcgagagcgttcttaaacaacacacggcgccgaaa
gtttgcgtaaattgtcacaatccaataccgaaaatcacgacgttgaagaacaaaattatg
actactaaagtatctgacgcacctaacgagaagacaaagtcgcgtggagtaatacataaa
ttagaaactgtgttgataatgcctgatcaatcgaaagaatatctccgaaacctttgggaa
aacgagaaggaattccttaaagtaatcgtgtcctgtttcgcgttggtggacatcgaacat
ccgaccgatatattcttcttggaagtcgtaccagttttgccacctatagtcaggccagtg
aattttgtaaatggccaaatgatagaacatccgcagactcaggtttataagagtattatc
caagattgtctcgttcttcgaaatattatacaaacgattcaggacggcgacacggaacaa
ttaccggaggagggtaagctcgttttcgaacaaataaaggggaatacaccgattgagaag
ttgcacaacgcgtggcaaagtttacaggtgaacgttgatcacataatggaccgtgacatg
aataaaacggcggagtctatgaactgtcagggattgaaacaggtgatagagaagaaagaa
ggagttatcaggatgcatatgatgggcaaaagagtgaatttcgctgctcgttcggtcatc
acgccggatcctaacttgaacatagacgagattggtattcctgaagcgttcgctctgaaa
ttaacgtatccgacgccggttacaccttggaacgtcgttcaactacgtcaattagttttg
aacggccccgacgttcatcccggggcggtaatgatcgaacacgaggacggcagtatacaa
cggatctcgactaaagaccctgttcacagagaagcgatcgcaaaacgtctgctaactaca
agcgacaaagcgaacaaatttttcaatggcatcaaaattgtacatagacatttacaaacc
ggtgacatcctattgctaaatcgtcagccgacgttacataaaccgagtatcatggctcac
aaggcacggattttaaaaggggagaagacattgcgtttacattacgctaactgcaaggct
tacaacgcggacttcgacggcgacgaaatgaacgcgcatttcccgcaaaatgagcttgcc
agaagcgaaggatacttcatagccaacgtatgcaatcaatatctcgtgccgaaagatggt
accccgctgagcggtttgattcaagatcacatggtttccggtgtccgcatgacagtaaga
ggagcattcttttcgcgagaggattacatgcaattagtttacgccgctttatctacgatg
caggacaatataattcttcttccacccagcatcctgaaaccgaagcctttatggtccggc
aaacaaatcatctcgactgttattattaatattattccattgcaacgagctcggatcaat
ctgacggcgagtgcgaagatcaatgtaagggaatggcaggttgagaaaccgcgacgatgg
aagggtggcggtaccgaattttcagatcctaaaacgatgtcggaagctgaagttataata
cgaaacggggaactgttatgcggcgtgcttgataaaatgcattatggcgcgacgccgttc
ggccttgtgcattgcgtgtttgaattgtacggcgcgacctgcacctcacaattgctaagc
gctttcggtaaattgttccaagccggattgcagaggaatgggttcacgcttggtattgaa
gatattttattattaaggaaggcggacaagaagcgaagagaaattatttctaattgtagg
aagatcggggaggatgttcacaggtcggtattagaattacccgaggatactccgatggac
gtagtcacatctcagatggaggagtcttattggaagaatccgaagttccgggcgcaggtc
gatcgaaaatataaaagtgcgctagatgtttacacgaatgatattaataaaacgtgttta
ccggctggtcttttgaaaaagtttccagagaacaatttgcaattgatggtgcaatctggc
gcgaagggatccacggtgaacactatgcagatttcttgtttgcttggacagatcgagtta
gaagggaaaaggccgcctttaatgatcagtgggaagagccttccgagttttcctgcatac
gatccatccccgagagccggcggtttcatcgacggcagattcatgacaggaatcaagcct
caagagtttttcttccattgcatggctggtcgcgaaggtctcattgataccgctgtgaaa
accagtaggtcaggatatttacaacgatgcctcatcaaacatctcgaaggattggtggtg
aattatgattcaacggtacgagactcggacggcagtttgatacaaatttattacggggaa
gacggtctcgatataccgggttcgcgatttttgaagaaagaacagctaggctttttggtg
gacaataaaaatgctatcgtcgacgaagggatgttaaagcacttgaaaactgatttggag
tccgaacaaatttcgaaatttgcgaagaggattaagaaatgggaaagtaaacacggtagc
gcgttacgaaaaagaagaatcagcccgttcacgagattttcgatgcaggatatgaacatt
aaggcttcgaagtttaaagaaatcgatgaaaacagtggcagaagtaaagcttctctatcg
tacatgagaaaatggttacgggacactgaagaaaataaaaaatggatttacgccgagtgt
gcgaaatgtccggacccggtgatgtcgagatacaggcaagacataaacttcggcgttctt
tccgagcgtttagagaatctgatagacgactatgtaaccaacaaatctacgaaccctttt
ataaagaagaaagatttgaaagaccttctgtcgacgaaggtaatgaaaaccgtttgcccg
ccaggggaaccggtgggtttattagcagcacaatcgataggagagccgtgttctcagctg
accttaaatacattccatttcgctggtcgtggagagatgaacgttacattgggtatacct
agactgcgcgaagtactgatgatggcatcgaaaaatattaaaacacctagcatggaaata
ccgttgcggaaggatttggataatgtgacgaaacggtcgaataaattgagactaaaattg
gccaaatgcgttctgtcagacgttttagataatgtcactgtaaacaggaaattggaagaa
tcgccacataggagtttggtatataccatgactgttaattttcttccgcacaaatcctac
aaaggagaattttgcgtgcagccgcgtgacgtattgaagaaaacggaagaaatatttttt
aaggaactattcagagagataaaaaaggtagccaaggtaaccggcgctttgttacacgtc
gaagaagagaaaaagtcgttgtacgaagacgacgctctgctggatcaaattgaacctggc
gaagccatcgaatctgctccgaagccacgggcgaacttaggagaaatgcacgagtcgtcg
gatgaagaagaagcggcggaagatgcggatgcaactgtagcgcggtcgatctcgcgtcac
aaagaaaatcaggagtacgaagatccggaagaagaggagctggaagatgtaattgacaag
gatgacgatgttgcgatggaaaatgcagaccagagatcgaatgctaacgaagaaaggcta
gatgacgaagatgacaatgtagagaacagaaagacagtaaaatctgtaaatgaaacggtc
aatgaacagaggaagaaaaatgttacgaatttatatgtttatgcgttggaatacgactac
gacgaggcgaaatttacgtggtgtaaattaaagttttggttacctcttgaaatgataaaa
atggatttgccaacaatcataaggaacgtcgctaatagagtcgtcttatgggaagtgcct
tgcataaaacgcgcttttacattccaaaataaagatggagaaactattcttaggaccgat
ggtattaacataatagaaatatttaaatacgatagatctctggatttaaacagattgtat
tccaacgatatttatgccatttctcaaacgtacggcatcgaagctgctaacagagttatc
ataaaagaagtaaaagatgtgttcaagatgtatggtatcacggtcgattctcgacatctg
tctttaatcgcggattacatgacattcgacggcaggtttcaacctcttagtcggaaagga
atggaagattctgcatctcctttacaacaaatgagcttcgaaagttctctgaatttcttg
agaaacgcaactttgcacggaaggcgagacaatttagtatctccatctagtcggctaatg
ttgggccagccttgcaagtctggtactggtgcgtgttccttgttagtaaaaatacaaaaa
caaccagagaccacattatcgataggtgcataa
DBGET
integrated database retrieval system
