Ceratina calcarata (carpenter bee): 108622258
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Entry
108622258 CDS
T06061
Name
(RefSeq) transcriptional regulator ATRX homolog isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccal03000
]
108622258
03036 Chromosome and associated proteins [BR:
ccal03036
]
108622258
Transcription factors [BR:
ccal03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
108622258
Chromosome and associated proteins [BR:
ccal03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108622258
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Motif
Other DBs
NCBI-GeneID:
108622258
NCBI-ProteinID:
XP_017875509
UniProt:
A0AAJ7IRX1
LinkDB
All DBs
Position
Unknown
AA seq
1956 aa
AA seq
DB search
MSSKRVKEGKCHEFNNKEPFYIKQRRMALNRLKESMKPLLDDNNTSEQKKSSVFKNDLDT
TSSSETDPEGKFAQSHTSRERTKLDKHNLKKDRRSSYINVRNDKSKRIESDSESSDTEDN
INDKRAERRDRRILMLKLKEKNLNTLHRDDTGSSSSKEFQKSKISHVGSNVMKKLARSQK
QNRMTSTDSNSESVNEKIATEKLSDKQNIFFKSGINKIMNKMKELCSEYELQVDNIKWKH
LKKDMRNYDSTEKVYKKLKTVIESMKEELDVQDKKLINFYEDWEKNCRSENTEHEDSSPS
EAEESKTAVNEKESEKLKNVSQVSPIVSECDDEIFSGNEAQATLGKNDKNKIENLPTIAE
ISMNDDSDQVDASPIVANRTIRDKILPVKTDLTEQTKLAEETGDQKETSQECPASDILSL
NVSVDDIFDETTIENVSPSPKIKDESDNGSETDVTLNKNGSDSMINERKRKRNNSSDTVE
GLEKSREKEMDSFSNTLDEEERAKKALLTSDSDTPPITLINDITTTVESSENDNIKETDA
TETMKPDKKRKKYNNRQNESEDKSPEDLTKIMEAESLAVRMLLESNSDDSLSHSEKPIFK
KSLKQKLNSTGSSEDSSSDDDSNLNGEKQNSSKEGQKKNERPSSSIEKQDNSSKDSNSNI
DSESSIGKRYSLRKKNAENKKDSTSLKMLVNNKMKNSIESDKIISCKVVLERLPKSVLNK
HNNTLEKSREYLESKEFRSLIRVDNLGRNTRSKSLTRSSNITQLCRNSKSKSKEAEETLL
DHLKRIEEGNFDEAVGNDAVSDPENDNTVMKTDTTMQSNEDLIKQADAVTKKMLLYSSDS
DAPIEKKVSSESDEEKNMNKSGKPVEKPIAKSTQEDSDKENDEEREKSRWRRHKLLTMKL
TSDSDSDVARQKWVKKQEKLAETAKNDQAEDSEKNNDSIMKRKPRTRRKIMVSDDSDVKS
DPDSNSSVELLENKSSDSDSSVGKRKKGNKRKMQKSSDSDSMTVKKKTKPKRKRIKNMSS
DSDAESDDQMTNSQGTPGKKGRKNIRKVMEEELVADDTKLAAKAEEERLKRIAERQKVYN
EMYEARLASEEKVDKLVLDFDPDTKKELVTVHEKLVKRLKPHQAEGIKFMWDACFESLER
IKTSPGSGCIIAHCMGLGKTLQVIALVYTLLTHEQTGVKTVLIVSPLNTVLNWLNEFNLW
LKDLDDYNDVDVYEMTKLKKNVERVYQLQHWHESGGVMIIGYEMFRNLSANNNRMRKKMR
EDTLRYLIDPGPDLIVCDEGHLLKNEDTALSKSIKRIKTLRRIVLTGTPLQNNLNEYHCM
VQFVKPSLLGTKAEFSNRFVNPITNGQFDDSTEYDVKLMKKRAYVLNKMLKGCVQRCDYS
VLTPFLPPKQEYVIFVSLTETQINLYRYYLNHLARKGRYTATLFADFQALQRIWTHPLVL
RMNSEKIEKLNEKKLDSESEGSLKDFIDDSDTESGKSSSSSSSVYIEDDDAAPNAGKSQN
KTSKRGTRNTPAIDVPEETEEPEKKEEEWWLQFVKPEDLEDMRVSAKLMLLFGILKECEQ
IGDKVLVFSQSLYSLTLIERFLEKIDDSTQNNSTSELIAGHTGSWSLGLDYFRLDGQTNA
ENRSAWCKIFNRPTNTRGRLFLISTRAGGLGINLTAANRVIIFDASWNPSHDVQSIFRVY
RFGQKKPCYVYRFLATGTMEEKIYNRQVTKLSLSCRVVDEQQIERHYSNNDLSELYTFEP
KTEDNQTLNLPKDRLLAEIFLKYKNYVKNYHEHDSLLENKTEEELNEEERKQAWTEYEEE
KKGKPKVLPTFAMQGAYTQNPLMNNQYTPIPQMNLATDYSNLRELLQKDYPNATPEMQQM
LTSRALAEMYNYWEKQTMNNVTKQLLEQPIQNQNTNLRAVISNPVALNRVNYVMPNVNAN
MSNQPNRTTSRQADDDDVIEVTSTSTVNNINKNQEE
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctaaaagggttaaggaaggtaagtgtcatgaatttaataacaaggaacctttt
tatatcaagcaaagacgcatggcactaaatagactaaaggaatcaatgaaaccattattg
gatgataataacacctctgaacagaaaaagtcttctgtatttaagaatgacttagacact
acatcatccagtgaaaccgatcctgaagggaagtttgctcagtcacatacaagcagggaa
cggacgaaacttgataagcataacctaaagaaagatagacgaagtagttacatcaatgtg
agaaatgataaaagtaaaaggatagaatcagattcagagtccagcgatactgaggataat
attaatgataaacgtgctgaaaggagagacagaaggatcttaatgttgaaattgaaggag
aagaacttgaacactttgcatagagatgatactggatccagttccagcaaagaatttcag
aaatcgaagatctctcacgtcggttcaaatgtaatgaaaaaactggctcgaagccaaaag
cagaatcgtatgacgtccacggattcgaattctgaatctgtgaatgaaaagatcgctaca
gaaaagctcagtgataaacagaatatattcttcaagtctggcattaataaaattatgaat
aaaatgaaggagctttgctcagaatatgaactgcaagtggataatattaagtggaagcat
ttgaagaaggatatgcgaaattatgactcgacagagaaagtatataaaaaattgaagacg
gtgatcgaaagtatgaaggaagagcttgacgtgcaagataagaagctaataaatttctac
gaggactgggagaagaattgtcgatcggagaacacggaacatgaagacagctcgccgagc
gaggctgaagaatcaaaaacagcggtgaacgagaaggaatcggagaaattaaagaatgtt
tctcaagtgtcacccatagtctccgaatgtgacgacgagatattttccggcaacgaggcg
caagcgacgttaggaaaaaatgataaaaataaaatcgaaaatcttcctactattgcagaa
atatcaatgaatgatgacagcgatcaggttgatgcttcaccgatcgtggcaaatagaact
ataagagacaaaatattgccggtcaagacagatttaacagagcaaacgaagttagctgag
gaaactggagatcaaaaggaaacatctcaagagtgtccagcttctgacatcctgagtctg
aacgtgtccgtggatgatatattcgatgaaaccacaatagaaaacgtatctccttcgcca
aaaatcaaagatgaaagcgataatggatcagagacggatgttactttaaataaaaacgga
agtgattccatgattaacgaaaggaaacgcaagaggaataattcgtctgatactgtcgaa
ggattagaaaagtcacgtgaaaaagaaatggacagtttttcgaacacactcgacgaagaa
gagcgggctaaaaaagctttgttaacttcggattcagatacgcccccaattacgttaatt
aacgatataactacaactgtagaatcgagcgaaaacgataacataaaggaaacggatgct
acagaaacaatgaaacccgataaaaagaggaaaaagtataataacaggcaaaatgaatcc
gaagataaatccccggaagatttgaccaaaattatggaggctgaatctctcgctgtccgt
atgcttctcgaatcgaactcagatgattctttaagtcattccgagaaacccatatttaaa
aagagtttgaaacagaaactaaattcgaccggtagtagcgaagattcaagttccgacgac
gacagtaatttgaatggtgagaaacagaattcctcaaaggaaggacaaaagaaaaatgaa
agaccttcgtcttcgattgaaaaacaagataacagcagcaaggactcgaactccaacatt
gatagcgagtcgagcatcggaaagaggtattctttaagaaaaaagaatgctgagaataag
aaagattcgacatcgcttaaaatgctagtaaataataagatgaagaattcgattgaatcg
gacaaaataatttcttgcaaggttgttctagagagattaccgaaaagcgtactaaataag
cataacaacacgttggaaaagtcacgggaatacttagaaagcaaagaatttcgaagttta
atccgtgtagataatctgggaagaaacactagaagcaagagcttgacgcgaagttcaaac
atcactcagttatgtagaaactcgaaaagtaagagcaaagaagcggaggaaacgttattg
gatcatttaaaaagaatcgaagaagggaacttcgatgaagccgtgggaaacgatgctgtt
tctgatcccgagaacgataatacagttatgaaaaccgataccactatgcaaagcaacgaa
gatttgatcaaacaggcagacgctgttacaaagaaaatgcttttgtattcgtcggattcg
gacgctcctatcgagaagaaagtctcgtctgaaagcgacgaggagaaaaatatgaataaa
tcgggaaaacctgtggagaaaccaatcgcgaaatcaacgcaggaagacagtgataaggaa
aatgacgaggaacgggagaaaagtagatggaggaggcataaactgttgacaatgaagctt
acctcagattcagactcggatgttgctagacaaaaatgggttaaaaagcaggaaaagttg
gcagagactgcgaaaaatgatcaagcagaggattcggagaagaataacgactccatcatg
aaacgcaaaccgagaactcgtcgaaaaattatggtttcagatgattcggatgtcaaatct
gaccctgactcgaatagttccgtagaattactagagaataaatcgtcggatagcgattct
tcagtgggaaaacggaagaagggaaataagcgcaaaatgcaaaaatcatccgactcagat
tcgatgacagttaaaaaaaaaaccaaacccaaacgaaagcgtattaaaaatatgtcgagc
gatagcgatgcagagagcgatgatcaaatgaccaattctcaaggaacgcccggtaagaaa
ggtcgcaaaaacatccggaaagtgatggaagaggaactggttgcggatgataccaagttg
gccgcaaaagcagaggaggagaggcttaaacgtattgcggagagacagaaggtgtacaac
gaaatgtacgaagctagactggctagcgaggaaaaggtggataaactagtattagatttc
gatccggacacgaagaaggagctagtaaccgttcacgagaagctggtcaaacgtctgaaa
ccgcatcaagccgaagggataaagttcatgtgggacgcgtgtttcgaatcgctcgagaga
ataaagacttcacctggctccggatgtataatcgcgcattgcatgggactggggaagacg
cttcaggtgattgcgttggtgtacacgctactaactcacgagcagaccggcgtcaaaact
gtgttgatcgtctcaccgctgaacacggtacttaactggttaaacgaattcaatttatgg
ttgaaggacctagacgactacaatgatgtggacgtgtacgagatgacaaaacttaaaaag
aacgtcgagcgtgtttaccaattacaacattggcacgaatccggcggcgtaatgatcatc
ggctacgagatgtttaggaatctcagtgcgaataacaacagaatgaggaagaagatgaga
gaagatactctgaggtatttgatagatcccgggccagacttgatagtttgcgacgagggg
catttactaaaaaacgaggacactgctctgagcaaatccataaaacgtattaagactcta
cggaggatcgttctcacaggaacgccgttgcagaataatttgaatgagtaccattgcatg
gtacagttcgtgaaacccagcttacttggtacgaaggcggaattctcaaacagatttgtg
aatccgattactaatggccagttcgatgactctacggagtacgacgttaaattaatgaag
aaacgggcgtatgtattaaataagatgttgaaaggttgcgtgcaaagatgcgattattcc
gtgttgacaccgtttttaccaccgaaacaggaatacgtgatatttgtcagcctaacggaa
acgcaaatcaatttgtaccgatattatttaaatcatctcgcgagaaagggccgttacacg
gcaactcttttcgccgatttccaagcgttgcaaaggatatggacccatcccctcgttttg
cggatgaactccgagaaaatcgaaaagttgaacgagaaaaaactagactccgaatctgaa
ggatctttaaaggacttcatcgatgattctgacacagaatctggaaagagtagcagcagc
tctagtagtgtctacattgaggatgacgatgcagctccaaacgctggaaagtcacagaac
aaaacatcaaaaaggggtacgaggaacacacctgcaatagacgtaccagaggaaacggag
gaacccgagaagaaggaagaagaatggtggttgcaatttgtgaagcccgaggatcttgaa
gacatgagggtttcggcaaaactgatgctgctctttggcattttgaaagaatgcgaacaa
atcggtgacaaagtgttggtattctcgcagtcgttatattcgttgactctgatcgaacgt
ttcctggagaagatcgatgatagcacccagaacaacagcacctcggagctgatcgctggt
cacaccggtagctggtcgttgggtttggattatttccggttggacggacaaacgaacgct
gagaacagaagcgcgtggtgcaagatatttaacaggccgacgaacacgagaggtagacta
ttcttaatctcgacgcgggctggtgggctgggaataaacctgactgctgccaatcgtgtc
atcatattcgacgccagttggaacccttctcacgatgtccaaagcatattccgcgtgtat
agattcggtcagaaaaaaccttgttacgtttatcgattcctagcaactggaacaatggag
gagaagatttacaatcgtcaggtgacaaaactgtcactctcttgcagggttgtcgacgag
caacagatagaacgtcattacagtaataatgatctcagcgaattgtataccttcgagccc
aaaaccgaagataatcaaactttgaatttaccaaaggacagattattggcagaaatattt
ttgaagtacaagaactatgtgaaaaattatcatgagcatgactccctcttagaaaacaaa
accgaggaagagttaaacgaggaagagagaaagcaggcttggacggagtacgaagaggaa
aagaagggaaaaccgaaagtgttaccaacgttcgcgatgcagggagcatacacccaaaat
ccgttgatgaataatcagtacactccgataccgcaaatgaacctagccacggattacagt
aatcttcgagaacttcttcagaaagattatcccaacgcaactccagaaatgcagcaaatg
ttgacgagtcgcgcgttggcagaaatgtacaactactgggaaaaacagactatgaacaat
gtcacgaagcaactactcgagcagccgatacagaatcaaaatacaaatttgagagcagtt
atatcgaatccagtagcgttaaatcgggtaaattacgtgatgccgaatgtaaacgcgaat
atgtcgaatcaaccaaataggaccaccagtagacaagcggacgacgatgatgttatagag
gtcacctctacgagtacagtgaataacataaataaaaatcaagaagagtaa
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integrated database retrieval system
