Ceratina calcarata (carpenter bee): 108622265
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Entry
108622265 CDS
T06061
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccal03041
]
108622265
Enzymes [BR:
ccal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108622265
Spliceosome [BR:
ccal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108622265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
SNF2-rel_dom
Cas3-like_C_2
LBD_receptor
Transformer
Motif
Other DBs
NCBI-GeneID:
108622265
NCBI-ProteinID:
XP_017875523
UniProt:
A0AAJ7IRL9
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MGRYRSRSRDRDRRRRSRSRSRSRSPRDRRNWGSSGGRDRGGGRNSRGQPGANLRKPRWD
LSRLEPFKKDFYVPHEAVQNRDLRIVEQYRSEKEITLKGKNIPNPVFTFEETGFPDYVLK
EIKRQGFTEPTSIQAQGWPIALSGRDMVGIASTGSGKTLSYILPAIVHINSQPKLGRKDG
PIALVLAPTRELAQQIQQVADDFGHSSGIRNTCLYGGAPKGAQARDLDGGVEIVIATPGR
LLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVK
NLAEDFLKDYAQINVGSLQLAANHNILQIIDVCQDYEKENKLSTLLKEIMAESENKTIVF
IETKRRVDEITRKMKRDGWPAVCIHGDKTQQERDWVLQDFRSGKAPILVATDVAARGLDV
EDVKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFTPNNSNKANDLIQVLKEANQVI
NPKLLELADSKSGGYGRHRGGRNRWRSRGGRNGKDRSYSRSRSRSHSREHNGRNNRRSYS
RSYSRSRSPVSNRTEVIGKSYWSSER
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgttacagaagtcgtagtcgtgacagagataggagacgtagatctcgtagtaga
tctcgtagcagatcaccaagggacagaagaaattggggcagcagtggtggcagagacaga
ggaggtggaaggaacagtcgaggtcaacccggagcaaacttaaggaaacctcgatgggat
ctgagtagattagagcccttcaaaaaagatttttatgtgccacatgaggcagttcaaaat
cgggatctgcgcatagtcgagcagtatcggagcgagaaggagattactcttaaaggaaaa
aatatacccaatcctgtattcacatttgaggagacaggtttcccagactatgttctaaaa
gagattaaacgacaaggtttcaccgagcccacgtcgatacaagcgcagggctggccgatt
gctttaagcggacgagacatggtaggaatcgcatctactggttccggaaaaactctgtct
tacatactccccgcgatcgttcacatcaacagtcaaccaaaattgggtagaaaagacggg
ccgatcgcgttggtgttagctccgacacgggagctcgcacaacagatccaacaagtagcc
gacgattttggccattcctccggcatccgaaatacttgcttgtacggaggagcaccaaaa
ggcgcgcaggctagagatttggatggtggcgtggaaatcgtaatagccacacccggcaga
ttattagatttcctcgaatcaggacgtacgaacttgaagagatgcacctatctggtccta
gacgaggcagacagaatgttggacatgggcttcgagcctcaaattaggaagattatagaa
cagataagaccggatcggcaaaccttaatgtggtctgctacttggcctaaggaagtgaag
aacttggctgaggacttcttaaaagattatgctcaaataaacgtcggttcgcttcagtta
gctgcgaatcacaacattttgcagatcatcgacgtctgtcaggattacgaaaaggaaaac
aagttgagcacacttctcaaagaaataatggcggaaagcgaaaacaaaactatagtattt
atcgaaacgaaacgccgagtagacgagataaccagaaaaatgaagagagatggctggccg
gccgtttgtatacatggggacaagacgcaacaagaaagagattgggttttacaagatttc
agatcggggaaagcgccgattcttgtcgctacagatgttgccgcgcgcggtcttgacgtt
gaagacgtcaagtttgtcatcaattttgactatccctcctgttcagaggattacgttcac
cgtatcggccgaacgggtcgacggcaaaaaactggtacagcatataccttttttacacct
aataattcgaataaggctaacgacctgatccaggtactaaaagaagcgaatcaggtgatc
aatccgaagctgttagagctcgccgatagtaaaagcggaggatacggaaggcacagaggt
ggaaggaacagatggcggtcacgaggtggccgtaacgggaaagaccgtagctactcgaga
agtcgaagccgaagtcacagtagggaacacaacgggcgtaataatcgtcgaagttacagc
agaagttattcccgaagtcgcagcccggttagcaatcgtacagaagttatcggtaaaagt
tactggagcagtgagagatga
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